Evidence map›Paper›PMID 27040691›Full record

ArticleAmerican journal of human genetics2016

Mutations in TBCK, Encoding TBC1-Domain-Containing Kinase, Lead to a Recognizable Syndrome of Intellectual Disability and Hypotonia.

Elizabeth J Bhoj, Dong Li, Margaret Harr, Shimon Edvardson, Orly Elpeleg, Elizabeth Chisholm, Jane Juusola, Ganka Douglas, Maria J Guillen Sacoto, Karine Siquier-Pernet and 14 more

Open access · bronzeAbstract read
In one paragraph

Article in American journal of human genetics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed, 1 pooled it
6.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 1 synthesis or guideline pooled it, 73 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. A novel mouse model of rare neurodevelopmental disorder, TBCK Syndrome.bioRxiv : the preprint server for biology · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors at 11 institutions in 5 countries.

Elizabeth J BhojCenter for Applied Genomics, Children's Hospital of Philadelphia, Philadelphia, PA 19104, USA; Department of Genetics, Children's Hospital of Philadelphia, Philadelphia, PA 19104, USA. Electronic address: bhoje@email.chop.edu.
Dong LiCenter for Applied Genomics, Children's Hospital of Philadelphia, Philadelphia, PA 19104, USA.
Margaret HarrDepartment of Genetics, Children's Hospital of Philadelphia, Philadelphia, PA 19104, USA.
Shimon EdvardsonPediatric Neurology Unit, Hadassah University Hospital, Mount Scopus, Jerusalem 91120, Israel; Monique and Jacques Roboh Department of Genetic Research, Hadassah-Hebrew University Medical Center, Jerusalem 91120, Israel.
Orly ElpelegMonique and Jacques Roboh Department of Genetic Research, Hadassah-Hebrew University Medical Center, Jerusalem 91120, Israel.
Elizabeth ChisholmDivision of Medical Genetics and Metabolism, Children's Hospital of The King's Daughters, Norfolk, VA 23507, USA.
Jane JuusolaGeneDx, Gaithersburg, MD 20877, USA.
Ganka DouglasGeneDx, Gaithersburg, MD 20877, USA.
Maria J Guillen SacotoGeneDx, Gaithersburg, MD 20877, USA.
Karine Siquier-PernetINSERM UMR 1163, Laboratory of Molecular and Pathophysiological Bases of Cognitive Disorders, Université Paris Descartes, Sorbonne Paris Cité, Institut Imagine, Necker-Enfants Malades Hospital, 75015 Paris, France.
Abdelkrim SaadiDépartement de Neurologie, Etablissement Hospitalier Spécialisé de Benaknoun, Algers, Algeria.
Christine Bole-FeysotGenomic Platform, INSERM UMR 1163, Université Paris Descartes, Sorbonne Paris Cité, Institut Imagine, 75015 Paris, France.
Patrick NitschkePlateforme de Bioinformatique, Université Paris Descartes, Sorbonne Paris Cité, Institut Imagine, 75015 Paris, France.
Alekhya NarravulaEmory Genetics Laboratory, Emory University, Decatur, GA 30033, USA.
Maria WalkeNicklaus Children's Hospital, Miami, FL, 33155, USA.
Michele B HornerDepartment of Medical Genetics & Genomic Medicine, St. Peter's University Hospital, New Brunswick, NJ 08901, USA.
Debra-Lynn Day-SalvatoreDepartment of Medical Genetics & Genomic Medicine, St. Peter's University Hospital, New Brunswick, NJ 08901, USA.
Parul JayakarNicklaus Children's Hospital, Miami, FL, 33155, USA.
Samantha A Schrier VerganoDivision of Medical Genetics and Metabolism, Children's Hospital of The King's Daughters, Norfolk, VA 23507, USA.
Mark A TarnopolskyDepartment of Pediatrics, McMaster University Medical Center, Hamilton, ON L8N 3Z5, Canada.
Madhuri HegdeEmory Genetics Laboratory, Emory University, Decatur, GA 30033, USA.
Laurence ColleauxINSERM UMR 1163, Laboratory of Molecular and Pathophysiological Bases of Cognitive Disorders, Université Paris Descartes, Sorbonne Paris Cité, Institut Imagine, Necker-Enfants Malades Hospital, 75015 Paris, France.
Peter CrinoDepartment of Neurology, Temple University, Philadelphia, PA 19122, USA.
Hakon HakonarsonCenter for Applied Genomics, Children's Hospital of Philadelphia, Philadelphia, PA 19104, USA.
Children's Hospital of Philadelphia · USDélégation Paris 5 · FRChildren's Hospital of The King's Daughters · USEmory University · USHadassah Medical Center · ILMiami Children's Hospital · USSaint Peter's University Hospital · USCentre Hospitalo-Universitaire Bab El Oued · DZMcMaster University Medical Centre · CATemple University · USUniversité Paris Cité · FR

Funding

Institutional Clinical and Translational Science AwardUL1TR000003 · NCATS · UNIVERSITY OF PENNSYLVANIA · PI FITZGERALD, GARRET A · 2012 to 2015
$38.9M
The Intellectual and Developmental Disabilities Research Center at CHOP/PennU54HD086984 · NICHD · CHILDREN'S HOSP OF PHILADELPHIA · PI SCHULTZ, ROBERT THOMAS · 2016 to 2020
$6.3M
NCATS NIH HHS UL1 TR000003NCATS NIH HHS UL1TR000003NICHD NIH HHS U54 HD086984
6 · The paper itself

Abstract

Through an international multi-center collaboration, 13 individuals from nine unrelated families and affected by likely pathogenic biallelic variants in TBC1-domain-containing kinase (TBCK) were identified through whole-exome sequencing. All affected individuals were found to share a core phenotype of intellectual disability and hypotonia, and many had seizures and showed brain atrophy and white-matter changes on neuroimaging. Minor non-specific facial dysmorphism was also noted in some individuals, including multiple older children who developed coarse features similar to those of storage disorders. TBCK has been shown to regulate the mammalian target of rapamycin (mTOR) signaling pathway, which is also stimulated by exogenous leucine supplementation. TBCK was absent in cells from affected individuals, and decreased phosphorylation of phospho-ribosomal protein S6 was also observed, a finding suggestive of downregulation of mTOR signaling. Lastly, we demonstrated that activation of the mTOR pathway in response to L-leucine supplementation was retained, suggesting a possible avenue for directed therapies for this condition.

Indexed as

MutationAllelesChildChild, PreschoolFemaleGenetic VariationHumansIntellectual DisabilityMaleMuscle HypotoniaProtein Serine-Threonine KinasesRacial GroupsSignal TransductionTOR Serine-Threonine KinasesMTOR protein, humanProtein Serine-Threonine KinasesTBCK protein, humanTOR Serine-Threonine Kinases

Identifiers

PMID27040691
PMCPMC4833465
OpenAlexW2325392078

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.