Evidence map›Paper›PMID 27039172›Full record

ArticleBMC evolutionary biology2016

Retracing the path of planar cell polarity.

Quentin Schenkelaars, Laura Fierro-Constain, Emmanuelle Renard, Carole Borchiellini

Open access · goldAbstract read
In one paragraph

Article in BMC evolutionary biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
9.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 40 citations in OpenAlex.

  1. Article
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  7. Review
  8. Article
  9. Ancestral roles of atypical cadherins in planar cell polarity.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  10. Review
  11. Review
  12. Phylogenetic evidence for the modular evolution of metazoan signalling pathways.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2017
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 1 country.

Quentin SchenkelaarsInstitut Méditerranéen de Biodiversité et d'Ecologie marine et continentale (IMBE UMR 7263), Aix Marseille Université, CNRS, IRD, Avignon Université, Station marine d'Endoume, Batterie des Lions, 13007, Marseille, France. quentin.schenkelaars@unige.ch.
Laura Fierro-ConstainInstitut Méditerranéen de Biodiversité et d'Ecologie marine et continentale (IMBE UMR 7263), Aix Marseille Université, CNRS, IRD, Avignon Université, Station marine d'Endoume, Batterie des Lions, 13007, Marseille, France.
Emmanuelle RenardInstitut Méditerranéen de Biodiversité et d'Ecologie marine et continentale (IMBE UMR 7263), Aix Marseille Université, CNRS, IRD, Avignon Université, Station marine d'Endoume, Batterie des Lions, 13007, Marseille, France.
Carole BorchielliniInstitut Méditerranéen de Biodiversité et d'Ecologie marine et continentale (IMBE UMR 7263), Aix Marseille Université, CNRS, IRD, Avignon Université, Station marine d'Endoume, Batterie des Lions, 13007, Marseille, France. carole.borchiellini@imbe.fr.
Aix-Marseille Université · FRCentre National de la Recherche Scientifique · FRInstitut de Recherche pour le Développement · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe Planar Cell Polarity pathway (PCP) has been described as the main feature involved in patterning cell orientation in bilaterian tissues. Recently, a similar phenomenon was revealed in cnidarians, in which the inhibition of this pathway results in the absence of cilia orientation in larvae, consequently proving the functional conservation of PCP signaling between Cnidaria and Bilateria. Nevertheless, despite the growing accumulation of databases concerning basal lineages of metazoans, very few information concerning the existence of PCP components have been gathered outside of Bilateria and Cnidaria. Thus, the origin of this module or its prevalence in early emerging metazoans has yet to be elucidated.

resultsThe present study addresses this question by investigating the genomes and transcriptomes from all poriferan lineages in addition to Trichoplax (Placozoa) and Mnemiopsis (Ctenophora) genomes for the presence of the core components of this pathway. Our results confirm that several PCP components are metazoan innovations. In addition, we show that all members of the PCP pathway, including a bona fide Strabismus ortholog (Van gogh), are retrieved only in one sponge lineage (Homoscleromorpha) out of four. This highly suggests that the full PCP pathway dates back at least to the emergence of homoscleromorph sponges. Consequently, several secondary gene losses would have occurred in the three other poriferan lineages including Amphimedon queenslandica (Demospongiae). Several proteins were not retrieved either in placozoans or ctenophores leading us to discuss the difficulties to predict orthologous proteins in basally branching animals. Finally, we reveal how the study of multigene families may be helpful to unravel the relationships at the base of the metazoan tree.

conclusionThe PCP pathway antedates the radiation of Porifera and may have arisen in the last common ancestor of animals. Oscarella species now appear as key organisms to understand the ancestral function of PCP signaling and its potential links with Wnt pathways.

Indexed as

Cell PolaritySignal TransductionAnimalsCnidariaCtenophoraDrosophilaEvolution, MolecularGenomePhylogenyPoriferaTranscriptomeCtenophoraMetazoan phylogenyMultigene familiesPlacozoaPlanar cell polarityPoriferaVan GoghWnt signaling

Identifiers

PMID27039172
PMCPMC4818920
OpenAlexW2317968987

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.