Evidence map›Paper›PMID 27038408›Full record

ArticleDepression and anxiety2016

GENOME-WIDE ASSOCIATION STUDY (GWAS) AND GENOME-WIDE BY ENVIRONMENT INTERACTION STUDY (GWEIS) OF DEPRESSIVE SYMPTOMS IN AFRICAN AMERICAN AND HISPANIC/LATINA WOMEN.

Erin C Dunn, Anna Wiste, Farid Radmanesh, Lynn M Almli, Stephanie M Gogarten, Tamar Sofer, Jessica D Faul, Sharon L R Kardia, Jennifer A Smith, David R Weir and 16 more

Open access · greenAbstract read
In one paragraph

Article in Depression and anxiety, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 65 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
65citing papers in PubMed, 3 pooled it
17.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

65 citing papers in PubMed, 3 syntheses or guidelines pooled it, 118 citations in OpenAlex.

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  20. Pathophysiological Roles of Auxiliary Calcium Channel αHandbook of experimental pharmacology · 2023
    Article

5 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

26 authors at 14 institutions in 2 countries.

Erin C DunnCenter for Human Genetic Research, Massachusetts General Hospital, Boston, Massachusetts.
Anna WisteCenter for Experimental Drugs and Diagnostics, Department of Psychiatry, Massachusetts General Hospital, Boston, Massachusetts.
Farid RadmaneshCenter for Human Genetic Research, Massachusetts General Hospital, Boston, Massachusetts.
Lynn M AlmliDepartment of Psychiatry and Behavioral Sciences, Emory University School of Medicine, Atlanta, Georgia.
Stephanie M GogartenDepartment of Biostatistics, University of Washington, Seattle, Washington.
Tamar SoferDepartment of Biostatistics, University of Washington, Seattle, Washington.
Jessica D FaulInstitute for Social Research, University of Michigan, Ann Arbor, Michigan.
Sharon L R KardiaDepartment of Epidemiology, University of Michigan, Ann Arbor, Michigan.
Jennifer A SmithDepartment of Epidemiology, University of Michigan, Ann Arbor, Michigan.
David R WeirInstitute for Social Research, University of Michigan, Ann Arbor, Michigan.
Wei ZhaoDepartment of Epidemiology, University of Michigan, Ann Arbor, Michigan.
Thomas W SoareCenter for Human Genetic Research, Massachusetts General Hospital, Boston, Massachusetts.
Saira S MirzaDepartment of Epidemiology, Erasmus Medical Center, Rotterdam, the Netherlands.
Karin HekDepartment of Epidemiology, Erasmus Medical Center, Rotterdam, the Netherlands.
Henning TiemeierDepartment of Epidemiology, Erasmus Medical Center, Rotterdam, the Netherlands.
Joseph S GoveasDepartment of Psychiatry and Behavioral Medicine, Medical College of Wisconsin, Milwaukee, Wisconsin.
Gloria E SartoCenter for Women's Health and Health Disparities Research, Department of Obstetrics and Gynecology, School of Medicine and Public Health, University of Wisconsin-Madison, Madison, Wisconsin.
Beverly M SnivelyDepartment of Biostatistical Sciences, Division of Public Health Sciences, Wake Forest School of Medicine, Winston-Salem, North Carolina.
Marilyn CornelisDepartment of Preventive Medicine, Northwestern University Feinberg School of Medicine, Chicago, Illinois.
Karestan C KoenenDepartment of Epidemiology, Mailman School of Public Health, Columbia University, New York, New York.
Peter KraftDepartment of Epidemiology, Harvard T.H. Chan School of Public Health, Boston, Massachusetts.
Shaun PurcellInstitute for Genomics and Multiscale Biology, Icahn School of Medicine at Mount Sinai, New York, New York.
Kerry J ResslerDepartment of Psychiatry and Behavioral Sciences, Emory University School of Medicine, Atlanta, Georgia.
Jonathan RosandCenter for Human Genetic Research, Massachusetts General Hospital, Boston, Massachusetts.
Sylvia Wassertheil-SmollerDepartment of Epidemiology and Population Health, Albert Einstein College of Medicine, Bronx, New York.
Jordan W SmollerCenter for Human Genetic Research, Massachusetts General Hospital, Boston, Massachusetts.
University of Michigan–Ann Arbor · USCenter for Human Genetics · USErasmus MC · NLMassachusetts General Hospital · USEmory University · USUniversity of Washington · USAlbert Einstein College of Medicine · USColumbia University · USHarvard University · USIcahn School of Medicine at Mount Sinai · USMedical College of Wisconsin · USNorthwestern University · USWake Forest University · USWisconsin Division of Public Health · US

Funding

HRS Yrs29-34: Y33 SSA CoFundingU01AG009740 · NIA · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Jessica Faul, KENNETH M LANGA · 1990 to 2026
$555.8M
Translational Research CoreP30DK020541 · NIDDK · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI STREAMSON C CHUA · 2015 to 2026
$27.7M
Creating a National Resource for Genetic Research in Behavioral & Health SciencesRC2AG036495 · NIA · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI WEIR, DAVID R. · 2009 to 2010
$7.4M
Expanding a National Resource for Genetic Research in Behavioral & Health ScienceRC4AG039029 · NIA · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI WEIR, DAVID R. · 2010 to 2010
$6.0M
Research and Mentoring on Integrating Psychiatric Genetics and NeuroscienceK24MH094614 · NIMH · MASSACHUSETTS GENERAL HOSPITAL · PI SMOLLER, JORDAN W · 2012 to 2016
$925k
Genes, early adversity, and sensitive periods in social-emotional developmentK01MH102403 · NIMH · MASSACHUSETTS GENERAL HOSPITAL · PI DUNN, ERIN CATHLEEN · 2014 to 2017
$710k
NHLBI NIH HHS HHSN268201100001INHLBI NIH HHS HHSN268201100002INHLBI NIH HHS HHSN268201100003INHLBI NIH HHS HHSN268201100004INHLBI NIH HHS HHSN268201100046CNIA NIH HHS HHSN271201100004CNIA NIH HHS RC2 AG036495NIA NIH HHS RC4 AG039029NIA NIH HHS U01 AG009740NIA NIH HHS U01AG009740NIDDK NIH HHS P30 DK020541NIMH NIH HHS K01 MH102403NIMH NIH HHS K01MH102403NIMH NIH HHS K24 MH094614NIMH NIH HHS K24MH094614NIMH NIH HHS L40 MH098379WHI NIH HHS HHSN268201100001CWHI NIH HHS HHSN268201100002CWHI NIH HHS HHSN268201100003CWHI NIH HHS HHSN268201100004C
6 · The paper itself

Abstract

backgroundGenome-wide association studies (GWAS) have made little progress in identifying variants linked to depression. We hypothesized that examining depressive symptoms and considering gene-environment interaction (GxE) might improve efficiency for gene discovery. We therefore conducted a GWAS and genome-wide by environment interaction study (GWEIS) of depressive symptoms.

methodsUsing data from the SHARe cohort of the Women's Health Initiative, comprising African Americans (n = 7,179) and Hispanics/Latinas (n = 3,138), we examined genetic main effects and GxE with stressful life events and social support. We also conducted a heritability analysis using genome-wide complex trait analysis (GCTA). Replication was attempted in four independent cohorts.

resultsNo SNPs achieved genome-wide significance for main effects in either discovery sample. The top signals in African Americans were rs73531535 (located 20 kb from GPR139, P = 5.75 × 10(-8) ) and rs75407252 (intronic to CACNA2D3, P = 6.99 × 10(-7) ). In Hispanics/Latinas, the top signals were rs2532087 (located 27 kb from CD38, P = 2.44 × 10(-7) ) and rs4542757 (intronic to DCC, P = 7.31 × 10(-7) ). In the GEWIS with stressful life events, one interaction signal was genome-wide significant in African Americans (rs4652467; P = 4.10 × 10(-10) ; located 14 kb from CEP350). This interaction was not observed in a smaller replication cohort. Although heritability estimates for depressive symptoms and stressful life events were each less than 10%, they were strongly genetically correlated (rG = 0.95), suggesting that common variation underlying self-reported depressive symptoms and stressful life event exposure, though modest on their own, were highly overlapping in this sample.

conclusionsOur results underscore the need for larger samples, more GEWIS, and greater investigation into genetic and environmental determinants of depressive symptoms in minorities.

Indexed as

Gene-Environment InteractionAgedBlack or African AmericanDepressionFemaleGenome-Wide Association StudyHispanic or LatinoHumansLife Change EventsMiddle AgedPhenotypePolymorphism, Single NucleotideRisk FactorsSelf Reportdepressiongene-environment interactiongenome-wide association studysocial supportstressful life events

Identifiers

PMID27038408
PMCPMC4826276
OpenAlexW2323517150

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.