Evidence map›Paper›PMID 27038268›Full record

ArticleCurrent protocols in protein science2016

In Situ Proteolysis for Crystallization of Membrane Bound Cytochrome P450 17A1 and 17A2 Proteins from Zebrafish.

Li Lei, Martin Egli

Open access · greenAbstract read
In one paragraph

Article in Current protocols in protein science, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.9field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Article
  3. Diffraction Techniques in Structural Biology.Current protocols in nucleic acid chemistry · 2016
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Li LeiDepartment of Biochemistry, Vanderbilt University, School of Medicine, Nashville, Tennessee.
Martin EgliDepartment of Biochemistry, Vanderbilt University, School of Medicine, Nashville, Tennessee.
Vanderbilt University · US

Funding

Structure and Function of P450 Enzymes in Steroid Hormone BiosynthesisR01GM103937 · NIGMS · VANDERBILT UNIVERSITY · PI EGLI, MARTIN · 2013 to 2016
$1.6M
NIGMS NIH HHS R01 GM103937
6 · The paper itself

Abstract

Fish and human cytochrome P450 (P450) 17A1 catalyze both steroid 17α-hydroxylation and 17α,20-lyase reactions. Fish P450 17A2 catalyzes only 17α-hydroxylation. Both enzymes are microsomal-type P450s, integral membrane proteins that bind to the membrane through their N-terminal hydrophobic segment, the signal anchor sequence. The presence of this N-terminal region renders expression of full-length proteins challenging or impossible. For some proteins, variable truncation of the signal anchor sequence precludes expression or results in poor expression levels. To crystallize P450 17A1 and 17A2 in order to gain insight into their different activities, we used an alternative N-terminal sequence to boost expression together with in situ proteolysis. Key features of our approach to identify crystallizable P450 fragments were the use of an N-terminal leader sequence, a screen composed of 12 proteases to establish optimal cleavage, variations of protease concentration in combination with an SDS-PAGE assay, and analysis of the resulting fragments using Edman sequencing. Described in this unit are protocols for vector preparation, expression, purification, and in situ proteolytic crystallization of two membrane-bound P450 proteins.

Indexed as

Cell MembraneCrystallizationElectrophoresis, Polyacrylamide GelEscherichia coliProtein EngineeringProtein Sorting SignalsProteolysisRecombinant ProteinsSteroid 17-alpha-HydroxylaseZebrafish Proteinscyp17a1 protein, zebrafishcyp17a2 protein, zebrafishProtein Sorting SignalsRecombinant ProteinsSteroid 17-alpha-HydroxylaseZebrafish Proteinscrystallizationin situ proteolysismembrane protein

Identifiers

PMID27038268
PMCPMC4831947
OpenAlexW2314975532

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.