Evidence map›Paper›PMID 27037954›Full record

ArticleBiomechanics and modeling in mechanobiology2016

Mathematical modelling of angiogenesis using continuous cell-based models.

F D Bookholt, H N Monsuur, S Gibbs, F J Vermolen

Abstract read
In one paragraph

Article in Biomechanics and modeling in mechanobiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Review
  5. The Future of Burn Care From a Complexity Science Perspective.Journal of burn care & research : official publication of the American Burn Association · 2022
    Article
  6. Article
  7. Computational modeling of therapy on pancreatic cancer in its early stages.Biomechanics and modeling in mechanobiology · 2020
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

F D BookholtDelft Institute of Applied Mathematics, Delft University of Technology, Delft, The Netherlands.
H N MonsuurDepartment of Dermatology (VUmc), VU University Medical Center, MOVE Research Institute Amsterdam, Amsterdam, The Netherlands.
S GibbsDepartment of Dermatology (VUmc), VU University Medical Center, MOVE Research Institute Amsterdam, Amsterdam, The Netherlands.
F J VermolenDelft Institute of Applied Mathematics, Delft University of Technology, Delft, The Netherlands. F.J.Vermolen@tudelft.nl.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In this work, we develop a mathematical formalism based on a 3D in vitro model that is used to simulate the early stages of angiogenesis. The model treats cells as individual entities that are migrating as a result of chemotaxis and durotaxis. The phenotypes used here are endothelial cells that can be distinguished into stalk and tip (leading) cells. The model takes into account the dynamic interaction and interchange between both phenotypes. Next to the cells, the model takes into account several proteins such as vascular endothelial growth factor, delta-like ligand 4, urokinase plasminogen activator and matrix metalloproteinase, which are computed through the solution of a system of reaction-diffusion equations. The method used in the present study is classified into the hybrid approaches. The present study, implemented in three spatial dimensions, demonstrates the feasibility of the approach that is qualitatively confirmed by experimental results.

Indexed as

Models, BiologicalNeovascularization, PhysiologicBiomechanical PhenomenaComputer SimulationDermisEndothelial CellsFibrinFinite Element AnalysisHumansMatrix MetalloproteinasesUrokinase-Type Plasminogen ActivatorVascular Endothelial Growth Factor AFibrinMatrix MetalloproteinasesUrokinase-Type Plasminogen ActivatorVascular Endothelial Growth Factor AAngiogenesisCell-based modelEndothelial cellsFinite-element methodIn vitro experimentsStalk cellsTip cells

Identifiers

PMID27037954
PMCPMC5106520

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.