Evidence map›Paper›PMID 27036978›Full record

ArticleDiagnostic microbiology and infectious disease2016

Rifabutin and rifampin resistance levels and associated rpoB mutations in clinical isolates of Mycobacterium tuberculosis complex.

Zenda L Berrada, Shou-Yean Grace Lin, Timothy C Rodwell, Duylinh Nguyen, Gisela F Schecter, Lucy Pham, J Michael Janda, Wael Elmaraachli, Antonino Catanzaro, Edward Desmond

Abstract read
In one paragraph

Article in Diagnostic microbiology and infectious disease, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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  4. Review
  5. Drug-Resistant Profiles and Genetic Diversity ofInfection and drug resistance · 2024
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  10. High-Throughput Variant Detection Using a Color-Mixing Strategy.The Journal of molecular diagnostics : JMD · 2022
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  14. Infection and drug resistance · 2022
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  15. "Upcycling" known molecules and targets for drug-resistant TB.Frontiers in cellular and infection microbiology · 2022
    Article
  16. Detection ofInfection and drug resistance · 2022
    Article
  17. Article
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  19. Review
  20. Infection and drug resistance · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Zenda L BerradaCalifornia Department of Public Health, Microbial Diseases Laboratory, Richmond, CA, USA. Electronic address: zberrada@smcgov.org.
Shou-Yean Grace LinCalifornia Department of Public Health, Microbial Diseases Laboratory, Richmond, CA, USA.
Timothy C RodwellUniversity of California, San Diego, CA, USA.
Duylinh NguyenCalifornia Department of Public Health, Microbial Diseases Laboratory, Richmond, CA, USA.
Gisela F SchecterCalifornia Department of Public Health, Microbial Diseases Laboratory, Richmond, CA, USA.
Lucy PhamCalifornia Department of Public Health, Microbial Diseases Laboratory, Richmond, CA, USA.
J Michael JandaCalifornia Department of Public Health, Microbial Diseases Laboratory, Richmond, CA, USA.
Wael ElmaraachliUniversity of California, San Diego, CA, USA.
Antonino CatanzaroUniversity of California, San Diego, CA, USA.
Edward DesmondCalifornia Department of Public Health, Microbial Diseases Laboratory, Richmond, CA, USA.

Funding

Rapid Tests for Drug Resistance to Detect Extensively Drug-Resistant TuberculosisU01AI082229 · NIAID · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI CATANZARO, ANTONINO · 2009 to 2013
$10.9M
An Integrated Tabletop Platform for Rapid Detection of XDR-TB in Clinical SamplesR01AI111435 · NIAID · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI RODWELL, TIMOTHY CHARLES · 2014 to 2018
$5.4M
Evolutionary and Functional Significance of Novel Mutations in MDR-XDR TBR01AI105185 · NIAID · SAN DIEGO STATE UNIVERSITY · PI VALAFAR, FARAMARZ · 2013 to 2021
$5.3M
NIAID NIH HHS R01 AI105185NIAID NIH HHS R01 AI111435NIAID NIH HHS U01 AI082229
6 · The paper itself

Abstract

Cross-resistance in rifamycins has been observed in rifampin (RIF)-resistant Mycobacterium tuberculosis complex isolates; some rpoB mutations do not confer broad in vitro rifamycin resistance. We examined 164 isolates, of which 102 were RIF-resistant, for differential resistance between RIF and rifabutin (RFB). A total of 42 unique single mutations or combinations of mutations were detected. The number of unique mutations identified exceeded that reported in any previous study. RFB and RIF MICs up to 8 μg/mL by MGIT 960 were studied; the cut-off values for susceptibility to RIF and RFB were 1 μg/mL and 0.5 μg/mL, respectively. We identified 31 isolates resistant to RIF but susceptible to RFB with the mutations D516V, D516F, 518 deletion, S522L, H526A, H526C, H526G, H526L, and two dual mutations (S522L + K527R and H526S + K527R). Clinical investigations using RFB to treat multidrug-resistant tuberculosis cases harboring those mutations are recommended.

Indexed as

Mutation, MissenseAntibiotics, AntitubercularDNA-Directed RNA PolymerasesHumansMicrobial Sensitivity TestsMycobacterium tuberculosisRifabutinRifampinTuberculosisAntibiotics, AntitubercularDNA-Directed RNA PolymerasesRifabutinRifampinRNA polymerase beta subunitmolecular drug-susceptibilitymulti-drug resistant tuberculosisMycobacterium tuberculosisrifabutin

Identifiers

PMID27036978
PMCPMC4873381

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.