Evidence map›Paper›PMID 27036068›Full record

ReviewMutation research. Reviews in mutation research

Contributions of DNA repair and damage response pathways to the non-linear genotoxic responses of alkylating agents.

Joanna Klapacz, Lynn H Pottenger, Bevin P Engelward, Christopher D Heinen, George E Johnson, Rebecca A Clewell, Paul L Carmichael, Yeyejide Adeleye, Melvin E Andersen

Open access · greenAbstract readReview
In one paragraph

Review in Mutation research. Reviews in mutation research. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
1.3field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 50 citations in OpenAlex.

  1. Article
  2. Quality control and signaling pathways at stalled ribosomes.Experimental & molecular medicine · 2026
    Review
  3. Review
  4. Article
  5. Article
  6. Article
  7. Review
  8. Less Severe Polymicrobial Sepsis in ConditionalInternational journal of molecular sciences · 2023
    Article
  9. Less Severe Lipopolysaccharide-Induced Inflammation in ConditionalInternational journal of molecular sciences · 2023
    Article
  10. Review
  11. Somatic Mutation Profiling in Head and Neck Paragangliomas.The Journal of clinical endocrinology and metabolism · 2022
    Article
  12. Review
  13. Article
  14. Article
  15. Review
  16. Article
  17. Review
  18. Article
  19. Mammalian DNA Polymerase Kappa Activity and Specificity.Molecules (Basel, Switzerland) · 2019
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 7 institutions in 3 countries.

Joanna KlapaczToxicology & Environmental Research and Consulting, The Dow Chemical Company, Midland, MI 48674, USA. Electronic address: jklapacz@dow.com.
Lynn H PottengerToxicology & Environmental Research and Consulting, The Dow Chemical Company, Midland, MI 48674, USA; Current Address: Olin Corporation, Midland, MI 48674, USA.
Bevin P EngelwardDepartment of Biological Engineering, MA Institute of Technology, Cambridge, MA 02139, USA.
Christopher D HeinenCenter for Molecular Medicine, Neag Comprehensive Cancer Center, University of CT Health Center, Farmington, CT 06030, USA.
George E JohnsonInstitute of Life Science, College of Medicine, Swansea University, SA2 8PP, UK.
Rebecca A ClewellHamner Institutes for Health Sciences, Research Triangle Park, NC 27709, USA.
Paul L CarmichaelUnilever, Safety & Environmental Assurance Centre, Colworth Science Park, Sharnbrook, Bedfordshire MK44 1LQ, UK.
Yeyejide AdeleyeUnilever, Safety & Environmental Assurance Centre, Colworth Science Park, Sharnbrook, Bedfordshire MK44 1LQ, UK.
Melvin E AndersenHamner Institutes for Health Sciences, Research Triangle Park, NC 27709, USA.
The Hamner Institutes for Health Sciences · USUnilever (United Kingdom) · GBDow Chemical (India) · INDow Chemical (United States) · USMassachusetts Institute of Technology · USSwansea University · GBUConn Health · US

Funding

TOXICOLOGY CORE UNITP30ES002109 · NIEHS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI YAFFE, MICHAEL B · 1985 to 2020
$25.6M
"Mechanisms of Damage-Induced Homologous Recombination"R01CA079827 · NCI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI ENGELWARD, BEVIN P. · 1999 to 2011
$1.9M
Comet-Chip: A High-Throughput DNA Damage Sensor for Enviornmental Health StudiesU01ES016045 · NIEHS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI ENGELWARD, BEVIN P. · 2007 to 2010
$1.8M
CometChip: Enabling Translation of DNA Damage and Repair AssaysR21ES019498 · NIEHS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI ENGELWARD, BEVIN P., SOBOL, ROBERT W · 2011 to 2012
$434k
Pluripotent stem cells as a novel model to test hereditary cancer variantsR21CA181959 · NCI · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI HEINEN, CHRISTOPHER D. · 2014 to 2015
$341k
NCI NIH HHS NIH CA181959NCI NIH HHS R01 CA079827NCI NIH HHS R01-CA079827NCI NIH HHS R21 CA181959NIEHS NIH HHS P30 ES002109NIEHS NIH HHS P30-ES002109NIEHS NIH HHS R21 ES019498NIEHS NIH HHS R21-ES019498NIEHS NIH HHS U01 ES016045NIEHS NIH HHS U01-ES016045
6 · The paper itself

Abstract

From a risk assessment perspective, DNA-reactive agents are conventionally assumed to have genotoxic risks at all exposure levels, thus applying a linear extrapolation for low-dose responses. New approaches discussed here, including more diverse and sensitive methods for assessing DNA damage and DNA repair, strongly support the existence of measurable regions where genotoxic responses with increasing doses are insignificant relative to control. Model monofunctional alkylating agents have in vitro and in vivo datasets amenable to determination of points of departure (PoDs) for genotoxic effects. A session at the 2013 Society of Toxicology meeting provided an opportunity to survey the progress in understanding the biological basis of empirically-observed PoDs for DNA alkylating agents. Together with the literature published since, this review discusses cellular pathways activated by endogenous and exogenous alkylation DNA damage. Cells have evolved conserved processes that monitor and counteract a spontaneous steady-state level of DNA damage. The ubiquitous network of DNA repair pathways serves as the first line of defense for clearing of the DNA damage and preventing mutation. Other biological pathways discussed here that are activated by genotoxic stress include post-translational activation of cell cycle networks and transcriptional networks for apoptosis/cell death. The interactions of various DNA repair and DNA damage response pathways provide biological bases for the observed PoD behaviors seen with genotoxic compounds. Thus, after formation of DNA adducts, the activation of cellular pathways can lead to the avoidance of a mutagenic outcome. The understanding of the cellular mechanisms acting within the low-dose region will serve to better characterize risks from exposures to DNA-reactive agents at environmentally-relevant concentrations.

Indexed as

Alkylating AgentsAlkylationApoptosisDNA AdductsDNA DamageDNA RepairDose-Response Relationship, DrugHumansMutagenicity TestsAlkylating AgentsDNA AdductsBiological pathwaysDNA damageDNA repairDose–responseLow-dosePoints of departure

Identifiers

PMID27036068
PMCPMC4818947
OpenAlexW2191182528

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.