Evidence map›Paper›PMID 27035976›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2016

Host-parasite oscillation dynamics and evolution in a compartmentalized RNA replication system.

Yohsuke Bansho, Taro Furubayashi, Norikazu Ichihashi, Tetsuya Yomo

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. RNA World with Inhibitors.Entropy (Basel, Switzerland) · 2024
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Progresses in Cell-Free In Vitro Evolution.Advances in biochemical engineering/biotechnology · 2023
    Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. An Approach to the De Novo Synthesis of Life.Accounts of chemical research · 2022
    Article
  17. Article
  18. Article
  19. Review
  20. Chemical Fueling Enables Molecular Complexification of Self-Replicators*.Angewandte Chemie (International ed. in English) · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Yohsuke BanshoGraduate School of Frontier Biosciences, Osaka University, Suita, Osaka 565-0871, Japan; Japan Society for the Promotion of Science, Chiyoda-ku, Tokyo 102-0083, Japan;
Taro FurubayashiGraduate School of Frontier Biosciences, Osaka University, Suita, Osaka 565-0871, Japan;
Norikazu IchihashiExploratory Research for Advanced Technology, Japan Science and Technology Agency, Kawaguchi-shi, Saitama 332-0012, Japan; Graduate School of Information Science and Technology, Osaka University, Suita, Osaka 565-0871, Japan ichihashi@ist.osaka-u.ac.jp tetsuyayomo@gmail.com.
Tetsuya YomoGraduate School of Frontier Biosciences, Osaka University, Suita, Osaka 565-0871, Japan; Exploratory Research for Advanced Technology, Japan Science and Technology Agency, Kawaguchi-shi, Saitama 332-0012, Japan; Graduate School of Information Science and Technology, Osaka University, Suita, Osaka 565-0871, Japan ichihashi@ist.osaka-u.ac.jp tetsuyayomo@gmail.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

To date, various cellular functions have been reconstituted in vitro such as self-replication systems using DNA, RNA, and proteins. The next important challenges include the reconstitution of the interactive networks of self-replicating species and investigating how such interactions generate complex ecological behaviors observed in nature. Here, we synthesized a simple replication system composed of two self-replicating host and parasitic RNA species. We found that the parasitic RNA eradicates the host RNA under bulk conditions; however, when the system is compartmentalized, a continuous oscillation pattern in the population dynamics of the two RNAs emerges. The oscillation pattern changed as replication proceeded mainly owing to the evolution of the host RNA. These results demonstrate that a cell-like compartment plays an important role in host-parasite ecological dynamics and suggest that the origin of the host-parasite coevolution might date back to the very early stages of the evolution of life.

Indexed as

Biological EvolutionHost-Parasite InteractionsAnimalsParasitesRNARNAcompartmentevolutionoscillationparasiteRNA replication

Identifiers

PMID27035976
PMCPMC4839452

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.