Evidence map›Paper›PMID 27035963›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2016

Heterodimerization within the TREK channel subfamily produces a diverse family of highly regulated potassium channels.

Joshua Levitz, Perrine Royal, Yannick Comoglio, Brigitte Wdziekonski, Sébastien Schaub, Daniel M Clemens, Ehud Y Isacoff, Guillaume Sandoz

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 49 papers.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed
4.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

49 citing papers in PubMed, 82 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Article
  6. Structure of the human KNature structural & molecular biology · 2025
    Article
  7. Article
  8. Article
  9. Tick-Derived Peptide Blocks Potassium Channel TREK-1.International journal of molecular sciences · 2024
    Article
  10. An ankyrin G-binding motif mediates TRAAK periodic localization at axon initial segments of hippocampal pyramidal neurons.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  11. Development of covalent chemogenetic KCell chemical biology · 2024
    Article
  12. Structure of the human KbioRxiv : the preprint server for biology · 2024
    Article
  13. Article
  14. Review
  15. Development of covalent chemogenetic KbioRxiv : the preprint server for biology · 2023
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 2 countries.

Joshua LevitzDepartment of Molecular and Cell Biology and Helen Wills Neuroscience Institute, University of California, Berkeley, CA 94720;
Perrine RoyalInstitute of Biology Valrose (iBV), Université Nice Sophia Antipolis, UMR 7277, 06100 Nice, France; CNRS, iBV, UMR 7277, 06100 Nice, France; INSERM, iBV, 06100 Nice, France; Laboratories of Excellence, Ion Channel Science and Therapeutics, Nice, France;
Yannick ComoglioInstitute of Biology Valrose (iBV), Université Nice Sophia Antipolis, UMR 7277, 06100 Nice, France; CNRS, iBV, UMR 7277, 06100 Nice, France; INSERM, iBV, 06100 Nice, France; Laboratories of Excellence, Ion Channel Science and Therapeutics, Nice, France;
Brigitte WdziekonskiInstitute of Biology Valrose (iBV), Université Nice Sophia Antipolis, UMR 7277, 06100 Nice, France; CNRS, iBV, UMR 7277, 06100 Nice, France; INSERM, iBV, 06100 Nice, France; Laboratories of Excellence, Ion Channel Science and Therapeutics, Nice, France;
Sébastien SchaubInstitute of Biology Valrose (iBV), Université Nice Sophia Antipolis, UMR 7277, 06100 Nice, France; CNRS, iBV, UMR 7277, 06100 Nice, France; INSERM, iBV, 06100 Nice, France;
Daniel M ClemensDepartment of Molecular and Cell Biology and Helen Wills Neuroscience Institute, University of California, Berkeley, CA 94720;
Ehud Y IsacoffDepartment of Molecular and Cell Biology and Helen Wills Neuroscience Institute, University of California, Berkeley, CA 94720; Physical Bioscience Division, Lawrence Berkeley National Laboratory, Berkeley, CA.
Guillaume SandozInstitute of Biology Valrose (iBV), Université Nice Sophia Antipolis, UMR 7277, 06100 Nice, France; CNRS, iBV, UMR 7277, 06100 Nice, France; INSERM, iBV, 06100 Nice, France; Laboratories of Excellence, Ion Channel Science and Therapeutics, Nice, France; sandoz@unice.fr.
Inserm · FRInstitut de Biologie Valrose · FRUniversity of California, Berkeley · USCentre National de la Recherche Scientifique · FRUniversity of California, San Francisco · US

Funding

STRUCTURAL REARRANGEMENTS IN CHANNEL GATINGR01NS035549 · NINDS · UNIVERSITY OF CALIFORNIA BERKELEY · PI ISACOFF, EHUD · 1996 to 2013
$4.1M
NINDS NIH HHS R01 NS035549
6 · The paper itself

Abstract

Twik-related K(+) channel 1 (TREK1), TREK2, and Twik-related arachidonic-acid stimulated K(+) channel (TRAAK) form the TREK subfamily of two-pore-domain K(+) (K2P) channels. Despite sharing up to 78% sequence homology and overlapping expression profiles in the nervous system, these channels show major differences in their regulation by physiological stimuli. For instance, TREK1 is inhibited by external acidification, whereas TREK2 is activated. Here, we investigated the ability of the members of the TREK subfamily to assemble to form functional heteromeric channels with novel properties. Using single-molecule pull-down (SiMPull) from HEK cell lysate and subunit counting in the plasma membrane of living cells, we show that TREK1, TREK2, and TRAAK readily coassemble. TREK1 and TREK2 can each heterodimerize with TRAAK, but do so less efficiently than with each other. We functionally characterized the heterodimers and found that all combinations form outwardly rectifying potassium-selective channels but with variable voltage sensitivity and pH regulation. TREK1-TREK2 heterodimers show low levels of activity at physiological external pH but, unlike their corresponding homodimers, are activated by both acidic and alkaline conditions. Modeling based on recent crystal structures, along with mutational analysis, suggests that each subunit within a TREK1-TREK2 channel is regulated independently via titratable His. Finally, TREK1/TRAAK heterodimers differ in function from TRAAK homodimers in two critical ways: they are activated by both intracellular acidification and alkalinization and are regulated by the enzyme phospholipase D2. Thus, heterodimerization provides a means for diversifying functionality through an expansion of the channel types within the K2P channels.

Indexed as

Cell LineDimerizationHumansHydrogen-Ion ConcentrationPotassium Channels, Tandem Pore Domainpotassium channel protein TREK-1Potassium Channels, Tandem Pore Domaincombinatorial diversityheteromerizationleak currentpotassium channelssingle-molecule fluorescence

Identifiers

PMID27035963
PMCPMC4839437
OpenAlexW2328478583

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.