Evidence map›Paper›PMID 27030168›Full record

ArticleDepression and anxiety2016

GLUCOCORTICOID RECEPTOR-RELATED GENES: GENOTYPE AND BRAIN GENE EXPRESSION RELATIONSHIPS TO SUICIDE AND MAJOR DEPRESSIVE DISORDER.

Honglei Yin, Hanga Galfalvy, Spiro P Pantazatos, Yung-Yu Huang, Gorazd B Rosoklija, Andrew J Dwork, Ainsley Burke, Victoria Arango, Maria A Oquendo, J John Mann

Open access · greenAbstract read
In one paragraph

Article in Depression and anxiety, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed, 1 pooled it
2.6field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 1 synthesis or guideline pooled it, 55 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. The Interaction BetweenBrain sciences · 2025
    Article
  4. Article
  5. Article
  6. SKA2 enhances stress-related glucocorticoid receptor signaling through FKBP4-FKBP5 interactions in neurons.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  7. Molecular Changes Associated with Suicide.International journal of molecular sciences · 2023
    Review
  8. Individual and Combined Effect ofBehavioral sciences (Basel, Switzerland) · 2023
    Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Neuropsychiatric disease and treatment · 2023
    Article
  14. Familial Linkage and Association of theInternational journal of molecular sciences · 2022
    Article
  15. Article
  16. A Brain-Centric Model of Suicidal Behavior.The American journal of psychiatry · 2020
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Honglei Yin *now at Department of Psychiatry, Nanfang Hospital, Southern Medical University, Guangzhou, China.
Hanga Galfalvy *Department of Psychiatry, Columbia University, New York.
Spiro P PantazatosDepartment of Psychiatry, Columbia University, New York.
Yung-Yu HuangDepartment of Psychiatry, Columbia University, New York.
Gorazd B RosoklijaDepartment of Psychiatry, Columbia University, New York.
Andrew J DworkDepartment of Psychiatry, Columbia University, New York.
Ainsley BurkeDepartment of Psychiatry, Columbia University, New York.
Victoria ArangoDepartment of Psychiatry, Columbia University, New York.
Maria A OquendoDepartment of Psychiatry, Columbia University, New York.
J John MannDepartment of Psychiatry, Columbia University, New York.
Columbia University · USNew York Psychoanalytic Society and Institute · USSouthern Medical University · CN

Funding

Suicidal Behavior: Aggression Subtypes, Childhood Adversity and Stress ResponseP50MH090964 · NIMH · NEW YORK STATE PSYCHIATRIC INSTITUTE DBA RESEARCH FOUNDATION FOR MENTAL HYGIENE, INC · PI MANN, JOSEPH JOHN · 2013 to 2022
$23.6M
THE NEUROBIOLOGY OF SUICIDAL BEHAVIORP50MH062185 · NIMH · NEW YORK STATE PSYCHIATRIC INSTITUTE DBA RESEARCH FOUNDATION FOR MENTAL HYGIENE, INC · PI MANN, JOSEPH JOHN · 2000 to 2009
$21.7M
POSTMORTEM NEUROCHEMICAL STUDIES IN SUICIDER01MH040210 · NIMH · WEILL MEDICAL COLLEGE OF CORNELL UNIV · PI UNDERWOOD, MARK D · 1985 to 2016
$7.0M
Suicidal Behavior in Mood Disorders:Genes and Intermediate PhenotypesR01MH082041 · NIMH · NEW YORK STATE PSYCHIATRIC INSTITUTE DBA RESEARCH FOUNDATION FOR MENTAL HYGIENE, INC · PI MANN, JOSEPH JOHN · 2008 to 2012
$3.6M
Integrative neuroinformatics to relate genomics to neurocircuitry and psychopathologyK01MH108721 · NIMH · NEW YORK STATE PSYCHIATRIC INSTITUTE DBA RESEARCH FOUNDATION FOR MENTAL HYGIENE, INC · PI PANTAZATOS, SPIRO PETER · 2016 to 2019
$739k
NIMH NIH HHS K01 MH108721NIMH NIH HHS P50 MH062185NIMH NIH HHS P50 MH090964NIMH NIH HHS R01 MH040210NIMH NIH HHS R01 MH082041
6 · The paper itself

Abstract

introductionWe tested the relationship between genotype, gene expression and suicidal behavior and major depressive disorder (MDD) in live subjects and postmortem samples for three genes, associated with the hypothalamic-pituitary-adrenal axis, suicidal behavior, and MDD; FK506-binding protein 5 (FKBP5), Spindle and kinetochore-associated protein 2 (SKA2), and Glucocorticoid Receptor (NR3C1). MATERIALS AND

methodsSingle-nucleotide polymorphisms (SNPs) and haplotypes were tested for association with suicidal behavior and MDD in a live (N = 277) and a postmortem sample (N = 209). RNA-seq was used to examine gene and isoform-level brain expression postmortem (Brodmann Area 9; N = 59). Expression quantitative trait loci (eQTL) relationships were examined using a public database (UK Brain Expression Consortium).

resultsWe identified a haplotype within the FKBP5 gene, present in 47% of the live subjects, which was associated with increased risk of suicide attempt (OR = 1.58, t = 6.03, P = .014). Six SNPs on this gene, three SNPs on SKA2, and one near NR3C1 showed before-adjustment association with attempted suicide, and two SNPs of SKA2 with suicide death, but none stayed significant after adjustment for multiple testing. Only the SKA2 SNPs were related to expression in the prefrontal cortex (pFCTX). One NR3C1 transcript had lower expression in suicide relative to nonsuicide sudden death cases (b = -0.48, SE = 0.12, t = -4.02, adjusted P = .004).

conclusionWe have identified an association of FKBP5 haplotype with risk of suicide attempt and found an association between suicide and altered NR3C1 gene expression in the pFCTX. Our findings further implicate hypothalamic pituitary axis dysfunction in suicidal behavior.

Indexed as

SuicideAdultChromosomal Proteins, Non-HistoneFemaleGenotypeHumansMajor Depressive DisorderMaleMiddle AgedPolymorphism, Single NucleotidePrefrontal CortexReceptors, GlucocorticoidTacrolimus Binding Protein 5Tacrolimus Binding ProteinsChromosomal Proteins, Non-HistoneNR3C1 protein, humanReceptors, GlucocorticoidSKA2 protein, humanTacrolimus Binding Protein 5Tacrolimus Binding Proteinsbiological markersdepressiongeneticsmood disorderssuicide/self-harm

Identifiers

PMID27030168
PMCPMC4889464
OpenAlexW2320259336

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.