Evidence map›Paper›PMID 27029739›Full record

ArticleNature communications2016

Blood-based biomarkers of age-associated epigenetic changes in human islets associate with insulin secretion and diabetes.

Karl Bacos, Linn Gillberg, Petr Volkov, Anders H Olsson, Torben Hansen, Oluf Pedersen, Anette Prior Gjesing, Hans Eiberg, Tiinamaija Tuomi, Peter Almgren and 5 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 138 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
138citing papers in PubMed, 4 pooled it
16.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

138 citing papers in PubMed, 4 syntheses or guidelines pooled it, 240 citations in OpenAlex.

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  13. Metformin Alone and in Combinations Alter the Methylation Patterns ofEndocrine, metabolic & immune disorders drug targets · 2026
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78 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

15 authors at 4 institutions in 4 countries.

Karl BacosEpigenetics and Diabetes Unit, Department of Clinical Sciences, Lund University Diabetes Centre, CRC 91:12, Jan Waldenströms gata 35, 20502 Malmö, Sweden.
Linn GillbergDepartment of Endocrinology, Diabetes and Metabolism, Rigshospitalet, Tagensvej 20, 2200 Copenhagen, Denmark.
Petr VolkovEpigenetics and Diabetes Unit, Department of Clinical Sciences, Lund University Diabetes Centre, CRC 91:12, Jan Waldenströms gata 35, 20502 Malmö, Sweden.
Anders H OlssonDepartment of Endocrinology, Diabetes and Metabolism, Rigshospitalet, Tagensvej 20, 2200 Copenhagen, Denmark.
Torben HansenThe Novo Nordisk Foundation Center for Basic Metabolic Research, Section of Metabolic Genetics, University of Copenhagen, Universitetsparken 1, 2100 Copenhagen, Denmark.
Oluf PedersenThe Novo Nordisk Foundation Center for Basic Metabolic Research, Section of Metabolic Genetics, University of Copenhagen, Universitetsparken 1, 2100 Copenhagen, Denmark.
Anette Prior GjesingThe Novo Nordisk Foundation Center for Basic Metabolic Research, Section of Metabolic Genetics, University of Copenhagen, Universitetsparken 1, 2100 Copenhagen, Denmark.
Hans EibergDepartment of Cellular and Molecular Medicine, Faculty of Health and Medical Sciences, University of Copenhagen, Blegdamsvej 3, 2200 Copenhagen, Denmark.
Tiinamaija TuomiDepartment of Endocrinology, Abdominal Centre, Helsinki University Hospital; Folkhalsan Research Center; Research Program for Diabetes and Obesity, Hartmaninkatu 8, Helsinki 00014, Finland.
Peter AlmgrenDiabetes and Endocrinology, Department of Clinical Sciences, Lund University Diabetes Centre, Jan Waldenströms gata 35, 20502 Malmö, Sweden.
Leif GroopFinnish Institute for Molecular Medicine, University of Helsinki, Hartmaninkatu 8, 00014 Helsinki, Finland.
Lena EliassonIslet cell exocytosis, Department of Clinical Sciences, Lund University Diabetes Centre, Jan Waldenströms gata 35, 20502 Malmö, Sweden.
Allan VaagDepartment of Endocrinology, Diabetes and Metabolism, Rigshospitalet, Tagensvej 20, 2200 Copenhagen, Denmark.
Tasnim DayehEpigenetics and Diabetes Unit, Department of Clinical Sciences, Lund University Diabetes Centre, CRC 91:12, Jan Waldenströms gata 35, 20502 Malmö, Sweden.
Charlotte LingEpigenetics and Diabetes Unit, Department of Clinical Sciences, Lund University Diabetes Centre, CRC 91:12, Jan Waldenströms gata 35, 20502 Malmö, Sweden.
Lund University · SEUniversity of Copenhagen · DKUniversity of Helsinki · FIRigshospitalet · DK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Aging associates with impaired pancreatic islet function and increased type 2 diabetes (T2D) risk. Here we examine whether age-related epigenetic changes affect human islet function and if blood-based epigenetic biomarkers reflect these changes and associate with future T2D. We analyse DNA methylation genome-wide in islets from 87 non-diabetic donors, aged 26-74 years. Aging associates with increased DNA methylation of 241 sites. These sites cover loci previously associated with T2D, for example, KLF14. Blood-based epigenetic biomarkers reflect age-related methylation changes in 83 genes identified in human islets (for example, KLF14, FHL2, ZNF518B and FAM123C) and some associate with insulin secretion and T2D. DNA methylation correlates with islet expression of multiple genes, including FHL2, ZNF518B, GNPNAT1 and HLTF. Silencing these genes in β-cells alter insulin secretion. Together, we demonstrate that blood-based epigenetic biomarkers reflect age-related DNA methylation changes in human islets, and associate with insulin secretion in vivo and T2D.

Indexed as

EpigenomicsAdultAgedAge FactorsBiomarkersDiabetes Mellitus, Type 2DNA MethylationGene Expression RegulationGene SilencingHumansInsulinInsulin SecretionIslets of LangerhansMiddle AgedBiomarkersInsulin

Identifiers

PMID27029739
PMCPMC4821875
OpenAlexW2332043828

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.