Evidence map›Paper›PMID 27028760›Full record

ArticleVirulence2016

Prevalence of mip virulence gene and PCR-base sequence typing of Legionella pneumophila from cooling water systems of two cities in Iran.

Roya Ahmadrajabi, Mohammad Reza Shakibaie, Zahra Iranmanesh, Hamid Reza Mollaei, Mohammad Hossein Sobhanipoor

Open access · goldAbstract read
In one paragraph

Article in Virulence, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.7field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Article
  3. Prevalence ofIranian journal of medical sciences · 2018
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Roya Ahmadrajabia Faculty of Medicine, Microbiology Section, Bam University of Medical Sciences , Bam , Iran.
Mohammad Reza Shakibaieb Department of Microbiology and Virology , Kerman University of Medical Sciences , Kerman , Iran.
Zahra Iranmaneshb Department of Microbiology and Virology , Kerman University of Medical Sciences , Kerman , Iran.
Hamid Reza Mollaeib Department of Microbiology and Virology , Kerman University of Medical Sciences , Kerman , Iran.
Mohammad Hossein Sobhanipoora Faculty of Medicine, Microbiology Section, Bam University of Medical Sciences , Bam , Iran.
Kerman University of Medical Sciences · IRBam University of Medical Sciences · IR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Legionella pneumophila is the primary respiratory pathogen and mostly transmitted to human through water cooling systems and cause mild to severe pneumonia with high mortality rate especially in elderly both in hospitals and community. However, current Legionella risk assessments may be compromised by uncertainties in Legionella detection methods. Here, we investigated the presence of L. pneumophila mip gene in water samples collected from different hospitals cooling towers, nursing homes and building/hotels water coolants from two geographical locations of Iran (Kerman and Bam cities) during summer season of 2015 by both nested and real-time PCR methods. Analysis of the 128 water samples for presence of the mip gene by nested-PCR revealed, 18 (23%) positive cases in Kerman and 7(14%) in Bam. However, when samples were tested by real-time PCR, we identified 4 more new cases of L. pneumophila in the hospitals as well as nursing homes water systems that were missed by nested-PCR. The highest rate of contamination was detected in water obtained from hospitals cooling towers in both the cities (p≤0.05). Dendrogram analysis and clonal relationship by PCR-base sequence typing (SBT) of the L. pneumophila genomic DNAs in Kerman water samples showed close clonal similarities among the isolates, in contrast, isolates identified from Bam city demonstrated two fingerprint patterns. The clones from hospital water samples were more related to the L. pneumophila serogroup- 1.

Indexed as

Water MicrobiologyBacterial ProteinsBase SequenceCitiesGenome, BacterialHospitalsHumansIranLegionella pneumophilaLegionnaires' DiseaseNursing HomesPeptidylprolyl IsomerasePrevalenceReal-Time Polymerase Chain ReactionSerotypingVirulenceBacterial ProteinsMip protein, Legionella pneumophilaPeptidylprolyl IsomeraseWaterLegionella pneumophilamip genenested-PCRreal-time PCR

Identifiers

PMID27028760
PMCPMC5026788
OpenAlexW2323919877

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.