Evidence map›Paper›PMID 27028652›Full record

ArticleBiophysical journal2016

Actin-Regulator Feedback Interactions during Endocytosis.

Xinxin Wang, Brian J Galletta, John A Cooper, Anders E Carlsson

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
4.0field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 31 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Guided by curvature: shaping cells by coupling curved membrane proteins and cytoskeletal forces.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2018
    Review
  15. Membrane bending by actin polymerization.Current opinion in cell biology · 2018
    Review
  16. Article
  17. Article
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Xinxin WangDepartment of Physics, Washington University, St. Louis, Missouri.
Brian J GallettaCell Biology and Physiology Center, National Heart, Lung, and Blood Institute, National Institutes of Health, Bethesda, Maryland.
John A CooperDepartment of Cell Biology and Physiology, Washington University School of Medicine, St Louis, Missouri.
Anders E CarlssonDepartment of Physics, Washington University, St. Louis, Missouri. Electronic address: aec@wustl.edu.
Washington University in St. Louis · USNational Institutes of Health · US

Funding

Molecular Mechanisms in Actin Assembly &Cell MotilityR01GM038542 · NIGMS · WASHINGTON UNIVERSITY · PI COOPER, JOHN A · 1989 to 2013
$7.4M
PROTEIN NETWORKS AND FORCE GENERATION IN YEAST ENDOCYTOSISR01GM107667 · NIGMS · WASHINGTON UNIVERSITY · PI CARLSSON, ANDERS E · 2014 to 2017
$1.2M
REGULATION OF ACTIN CAPPING PROTEINR01GM095509 · NIGMS · WASHINGTON UNIVERSITY · PI COOPER, JOHN A · 2012 to 2015
$1.1M
Control of Actin Assembly and Cell Migration by Actin-Regulating ProteinsR01GM086882 · NIGMS · WASHINGTON UNIVERSITY · PI CARLSSON, ANDERS E · 2008 to 2011
$1.0M
NIGMS NIH HHS R01 GM038542NIGMS NIH HHS R01 GM086882NIGMS NIH HHS R01 GM095509NIGMS NIH HHS R01 GM107667NIGMS NIH HHS R01 GM38542NIGMS NIH HHS R01 GM95509
6 · The paper itself

Abstract

Endocytosis mediated by clathrin, a cellular process by which cells internalize membrane receptors and their extracellular ligands, is an important component of cell signaling regulation. Actin polymerization is involved in endocytosis in varying degrees depending on the cellular context. In yeast, clathrin-mediated endocytosis requires a pulse of polymerized actin and its regulators, which recruit and activate the Arp2/3 complex. In this article, we seek to identify the main protein-protein interactions that 1) cause actin and its regulators to appear in pulses, and 2) determine the effects of key mutations and drug treatments on actin and regulator assembly. We perform a joint modeling/experimental study of actin and regulator dynamics during endocytosis in the budding yeast Saccharomyces cerevisiae. We treat both a stochastic model that grows an explicit three-dimensional actin network, and a simpler two-variable Fitzhugh-Nagumo type model. The models include a negative-feedback interaction of F-actin onto the Arp2/3 regulators. Both models explain the pulse time courses and the effects of interventions on actin polymerization: the surprising increase in the peak F-actin count caused by reduced regulator branching activity, the increase in F-actin resulting from slowing of actin disassembly, and the increased Arp2/3 regulator lifetime resulting from latrunculin treatment. In addition, they predict that decreases in the regulator branching activity lead to increases in accumulation of regulators, and we confirmed this prediction with experiments on yeast harboring mutations in the Arp2/3 regulators, using quantitative fluorescence microscopy. Our experimental measurements suggest that the regulators act quasi-independently, in the sense that accumulation of a particular regulator is most strongly affected by mutations of that regulator, as opposed to the others.

Indexed as

EndocytosisFeedback, PhysiologicalActinsComputer SimulationModels, BiologicalMutationProtein DomainsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsStochastic ProcessesTime FactorsActinsSaccharomyces cerevisiae Proteins

Identifiers

PMID27028652
PMCPMC4816763
OpenAlexW2328067599

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.