Evidence map›Paper›PMID 27028089›Full record

ArticleThe Journal of general virology2016

Poly(ADP-ribose) polymerase-1 silences retroviruses independently of viral DNA integration or heterochromatin formation.

Denisse A Gutierrez, Luis Valdes, Che Serguera, Manuel Llano

Open access · greenAbstract read
In one paragraph

Article in The Journal of general virology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.5field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 10 citations in OpenAlex.

  1. Review
  2. Review
  3. NADFrontiers in molecular biosciences · 2021
    Review
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  6. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Denisse A GutierrezDepartment of Biological Sciences, University of Texas at El Paso, 500 West University Ave., El Paso, TX 79968, USA.
Luis ValdesDepartment of Biological Sciences, University of Texas at El Paso, 500 West University Ave., El Paso, TX 79968, USA.
Che SergueraINSERM MIRCen LMB, Fontenay-aux-Roses, France.
Manuel LlanoDepartment of Biological Sciences, University of Texas at El Paso, 500 West University Ave., El Paso, TX 79968, USA.
The University of Texas at El Paso · USCEA Paris-Saclay - Etablissement de Fontenay-aux-roses · FR

Funding

TOXICOLOGY PROJECTG12RR008124 · NCRR · UNIVERSITY OF TEXAS EL PASO · PI AGUILERA, RENATO J · 1992 to 2011
$20.8M
Regulation of the HIV cofactor activity of LEDGF/p75 by interacting proteinsSC1AI098238 · NIAID · UNIVERSITY OF TEXAS EL PASO · PI LLANO, MANUEL · 2011 to 2014
$1.4M
NCRR NIH HHS G12 RR008124NIAID NIH HHS SC1 AI098238
6 · The paper itself

Abstract

PARP-1 silences retrotransposons in Drosophila, through heterochromatin maintenance, and integrated retroviruses in chicken. Here, we determined the role of viral DNA integration and cellular heterochromatin in PARP-1-mediated retroviral silencing using HIV-1-derived lentiviral vectors and Rous-associated virus type 1 (RAV-1) as models. Analysis of the infection of PARP-1 knockout and control cells with HIV-1 harbouring WT integrase, in the presence or absence of an integrase inhibitor, or catalytic-dead mutant integrase indicated that silencing does not require viral DNA integration. The mechanism involves the catalytic activity of histone deacetylases but not that of PARP-1. In contrast to Drosophila, lack of PARP-1 in avian cells did not affect chromatin compaction globally or at the RAV-1 provirus, or the cellular levels of histone H3 N-terminal acetylated or Lys27 trimethylated, as indicated by micrococcal nuclease accessibility and immunoblot assays. Therefore, PARP-1 represses retroviruses prior to viral DNA integration by mechanisms involving histone deacetylases but not heterochromatin formation.

Indexed as

AnimalsAvian Leukosis VirusCell LineChickensDNA, ViralDrosophilaDrosophila ProteinsHeterochromatinHistone DeacetylasesHistonesHIV-1HIV IntegraseHIV Integrase InhibitorsPoly (ADP-Ribose) Polymerase-1Raltegravir PotassiumVirus IntegrationDNA, ViralDrosophila ProteinsHeterochromatinHistone DeacetylasesHistonesHIV IntegraseHIV Integrase InhibitorsParp protein, DrosophilaPoly (ADP-Ribose) Polymerase-1Raltegravir Potassium

Identifiers

PMID27028089
PMCPMC7011754
OpenAlexW2328974834

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.