Evidence map›Paper›PMID 27027444›Full record

ArticleOncotarget2016

Pyrosequencing quantified methylation level of BRCA1 promoter as prognostic factor for survival in breast cancer patient.

Feng-Feng Cai, Su Chen, Ming-Hong Wang, Xiao-Yan Lin, Lian Zhang, Jia-Xin Zhang, Lian-Xin Wang, Jun Yang, Jin-Hua Ding, Xin Pan and 2 more

Abstract read
In one paragraph

Article in Oncotarget, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Association of BRCA1 Promoter Methylation with Breast Cancer in Asia: A Meta- AnalysisAsian Pacific journal of cancer prevention : APJCP · 2018
    Pooled it
  2. Higher Levels ofMedical sciences (Basel, Switzerland) · 2026
    Article
  3. Review
  4. Review
  5. Review
  6. Review
  7. Cancers · 2020
    Article
  8. Article
  9. Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Feng-Feng CaiDepartment of Breast Surgery, Yangpu Hospital, Tongji University School of Medicine, Shanghai, PR China.
Su ChenDepartment of Molecular and Cellular Biology, School of Forensic Sciences, Xi'an Jiao Tong University Health Science Center, Xi'an, Shaanxi, PR China.
Ming-Hong WangDepartment of General Practice, Yangpu Hospital, Tongji University School of Medicine, Shanghai, PR China.
Xiao-Yan LinDepartment of Breast Surgery, Yangpu Hospital, Tongji University School of Medicine, Shanghai, PR China.
Lian ZhangDepartment of Breast Surgery, Yangpu Hospital, Tongji University School of Medicine, Shanghai, PR China.
Jia-Xin ZhangDepartment of Breast Surgery, Fudan University Shanghai Cancer Center, Shanghai, PR China.
Lian-Xin WangDepartment of General Surgery, Qidong Hospital, Jiangsu, PR China.
Jun YangDepartment of General Surgery, Qidong Hospital, Jiangsu, PR China.
Jin-Hua DingDepartment of Thyroid and Breast Surgery, Ningbo Medical Center Lihuili Eastern Hospital, Ningbo, Zhejiang, PR China.
Xin PanCentral Laboratory, Yangpu Hospital, Tongji University School of Medicine, Shanghai, PR China.
Zhi-Ming ShaoDepartment of Breast Surgery, Key Laboratory of Breast Cancer in Shanghai, Fudan University Shanghai Cancer Center, Department of Oncology, Shanghai Medical College, Fudan University, Shanghai, PR China.
Ewelina BiskupDepartment of Oncology, University Hospital of Basel, Basel, Switzerland.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

BRCA1 promoter methylation is an essential epigenetic transcriptional silencing mechanism, related to breast cancer (BC) occurrence and progression. We quantified the methylation level of BRCA1 promoter and evaluated its significance as prognostic and predictive factor. BRCA1 promoter methylation level was quantified by pyrosequencing in surgical cancerous and adjacent normal specimens from 154 BC patients. A follow up of 98 months was conducted to assess the correlation between BRCA1-methylation level vs. overall survival (OS) and disease free survival (DFS). The mean methylation level in BC tissues was significantly higher (mean 32.6%; median 31.9%) than in adjacent normal samples (mean 16.2%; median 13.0%) (P < 0.0001). Tumor stage (R = 0.6165, P < 0.0001) and size (R = 0.7328, P < 0.0001) were significantly correlated with the methylation level. Patients with unmethylated BRCA1 had a better OS and DFS compared to the methylated group (each P < 0.0001). BRCA1 promoter methylation level has a statistically significance on survival in BC patients (HazR = 1.465, P = 0.000) and is an independent prognostic factor for OS in BC patients (HazR = 2.042, P = 0.000). Patients with ductal type, HER2 negative, lymph node negative stage 1+2 tumors had a better OS and DFS. Classification of grades and molecular subtypes did not show any prognostic significance. Pyrosequencing is a precise and efficient method to quantify BRCA1 promoter methylation level, with a high potential for future clinical implication, as it identifies subgroups of patients with poorer prognosis.

Indexed as

DNA MethylationBRCA1 ProteinBreast NeoplasmsDisease-Free SurvivalFemaleHumansMiddle AgedPrognosisPromoter Regions, GeneticSurvival AnalysisBRCA1 ProteinBRCA1 protein, humanBRCA1breast cancermethylationprognosispyrosequencing

Identifiers

PMID27027444
PMCPMC5053667

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.