Evidence map›Paper›PMID 27026706›Full record

ArticleThe Journal of biological chemistry2016

Identification of Avian Corticosteroid-binding Globulin (SerpinA6) Reveals the Molecular Basis of Evolutionary Adaptations in SerpinA6 Structure and Function as a Steroid-binding Protein.

Ganna Vashchenko, Samir Das, Kyung-Mee Moon, Jason C Rogalski, Matthew D Taves, Kiran K Soma, Filip Van Petegem, Leonard J Foster, Geoffrey L Hammond

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 21 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Review
  5. Article
  6. Functional implications of corticosteroid-binding globulinJournal of molecular endocrinology · 2018
    Article
  7. Article
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Ganna VashchenkoFrom the Departments of Cellular and Physiological Sciences.
Samir DasBiochemistry and Molecular Biology, and.
Kyung-Mee MoonBiochemistry and Molecular Biology, and.
Jason C RogalskiBiochemistry and Molecular Biology, and.
Matthew D TavesPsychology, University of British Columbia, Vancouver, British Columbia V6T 1Z3, Canada.
Kiran K SomaPsychology, University of British Columbia, Vancouver, British Columbia V6T 1Z3, Canada.
Filip Van PetegemBiochemistry and Molecular Biology, and.
Leonard J FosterBiochemistry and Molecular Biology, and.
Geoffrey L HammondFrom the Departments of Cellular and Physiological Sciences, geoffrey.hammond@ubc.ca.
University of British Columbia · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Corticosteroid-binding globulin (CBG) was isolated from chicken serum and identified by mass spectrometry and genomic analysis. This revealed that the organization and synteny of avian and mammalian SerpinA6 genes are conserved. Recombinant zebra finch CBG steroid-binding properties reflect those of the natural protein in plasma and confirm its identity. Zebra finch and rat CBG crystal structures in complex with cortisol resemble each other, but their primary structures share only ∼40% identity, and their steroid-binding site topographies differ in several unexpected ways. Remarkably, a tryptophan that anchors ligands in mammalian CBG steroid-binding sites is replaced by an asparagine. Phylogenetic comparisons show that reptilian CBG orthologs share this unexpected property. Glycosylation of this asparagine in zebra finch CBG does not influence its steroid-binding affinity, but we present evidence that it may participate in protein folding and steroid-binding site formation. Substitutions of amino acids within zebra finch CBG that are conserved only in birds reveal how they contribute to their distinct steroid-binding properties, including their high (nanomolar) affinities for glucocorticoids, progesterone, and androgens. As in mammals, a protease secreted by Pseudomonas aeruginosa cleaves CBG in zebra finch plasma within its reactive center loop and disrupts steroid binding, suggesting an evolutionarily conserved property of CBGs. Measurements of CBG mRNA in zebra finch tissues indicate that liver is the main site of plasma CBG production, and anti-zebra finch CBG antibodies cross-react with CBGs in other birds, extending opportunities to study how CBG regulates the actions of glucocorticoids and sex steroids in these species.

Indexed as

Evolution, MolecularAdaptation, PhysiologicalAmino Acid SequenceAnimalsAvian ProteinsBirdsChickensCrystallography, X-RayFinchesGlycosylationModels, MolecularPhylogenyRatsSequence Homology, Amino AcidSparrowsTranscortinAvian ProteinsTranscortinandrogenbirdsglucocorticoidN-linked glycosylationprogesteroneprotein crystallizationserine proteinase inhibitorstress

Identifiers

PMID27026706
PMCPMC4900275
OpenAlexW2319764905

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.