Evidence map›Paper›PMID 27026185›Full record

ArticleMicrobial cell factories2016

Homogeneity and heterogeneity in amylase production by Bacillus subtilis under different growth conditions.

Tina N Ploss, Ewoud Reilman, Carmine G Monteferrante, Emma L Denham, Sjouke Piersma, Anja Lingner, Jari Vehmaanperä, Patrick Lorenz, Jan Maarten van Dijl

Open access · goldAbstract read
In one paragraph

Article in Microbial cell factories, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
6.3field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 41 citations in OpenAlex.

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  8. TerC Proteins Function During Protein Secretion to Metalate Exoenzymes.bioRxiv : the preprint server for biology · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 4 countries.

Tina N PlossAB Enzymes GmbH, Feldbergstrasse 78, 64293, Darmstadt, Germany.
Ewoud ReilmanDepartment of Medical Microbiology, University of Groningen, University Medical Center Groningen, Hanzeplein 1, 9700 RD, Groningen, The Netherlands.
Carmine G MonteferranteDepartment of Medical Microbiology, University of Groningen, University Medical Center Groningen, Hanzeplein 1, 9700 RD, Groningen, The Netherlands.
Emma L DenhamDepartment of Medical Microbiology, University of Groningen, University Medical Center Groningen, Hanzeplein 1, 9700 RD, Groningen, The Netherlands.
Sjouke PiersmaDepartment of Medical Microbiology, University of Groningen, University Medical Center Groningen, Hanzeplein 1, 9700 RD, Groningen, The Netherlands.
Anja LingnerAB Enzymes GmbH, Feldbergstrasse 78, 64293, Darmstadt, Germany.
Jari VehmaanperäRoal Oy, Tykkimäentie 15b, 05200, Rajamäki, Finland.
Patrick LorenzAB Enzymes GmbH, Feldbergstrasse 78, 64293, Darmstadt, Germany.
Jan Maarten van DijlDepartment of Medical Microbiology, University of Groningen, University Medical Center Groningen, Hanzeplein 1, 9700 RD, Groningen, The Netherlands. j.m.van.dijl01@umcg.nl.
University of Groningen · NLABEnzymes (Germany) · DERoal (Finland) · FIUniversity Medical Center Groningen · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundBacillus subtilis is an important cell factory for the biotechnological industry due to its ability to secrete commercially relevant proteins in large amounts directly into the growth medium. However, hyper-secretion of proteins, such as α-amylases, leads to induction of the secretion stress-responsive CssR-CssS regulatory system, resulting in up-regulation of the HtrA and HtrB proteases. These proteases degrade misfolded proteins secreted via the Sec pathway, resulting in a loss of product. The aim of this study was to investigate the secretion stress response in B. subtilis 168 cells overproducing the industrially relevant α-amylase AmyM from Geobacillus stearothermophilus, which was expressed from the strong promoter P(amyQ)-M.

resultsHere we show that activity of the htrB promoter as induced by overproduction of AmyM was "noisy", which is indicative for heterogeneous activation of the secretion stress pathway. Plasmids were constructed to allow real-time analysis of P(amyQ)-M promoter activity and AmyM production by, respectively, transcriptional and out-of-frame translationally coupled fusions with gfpmut3. Our results show the emergence of distinct sub-populations of high- and low-level AmyM-producing cells, reflecting heterogeneity in the activity of P(amyQ)-M. This most likely explains the heterogeneous secretion stress response. Importantly, more homogenous cell populations with regard to P(amyQ)-M activity were observed for the B. subtilis mutant strain 168degUhy32, and the wild-type strain 168 under optimized growth conditions.

conclusionExpression heterogeneity of secretory proteins in B. subtilis can be suppressed by degU mutation and optimized growth conditions. Further, the out-of-frame translational fusion of a gene for a secreted target protein and gfp represents a versatile tool for real-time monitoring of protein production and opens novel avenues for Bacillus production strain improvement.

Indexed as

AmylasesBacillus subtilisBacterial ProteinsBacteriological TechniquesCloning, MolecularGene Expression Regulation, BacterialGeobacillus stearothermophilusMetabolic EngineeringOrganisms, Genetically ModifiedSecretory PathwayAmylasesBacterial ProteinsAmylaseBacillus subtilisHeterogeneitySecretion stressTranscriptionTranslation

Identifiers

PMID27026185
PMCPMC4812647
OpenAlexW2314515104

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.