Evidence map›Paper›PMID 27025525›Full record

ArticleAntibiotics (Basel, Switzerland)2016

Identification of a Fragment-Based Scaffold that Inhibits the Glycosyltransferase WaaG from Escherichia coli.

Claudio Muheim, Amin Bakali, Olof Engström, Åke Wieslander, Daniel O Daley, Göran Widmalm

Open access · goldAbstract read
In one paragraph

Article in Antibiotics (Basel, Switzerland), 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.3field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Frontiers in microbiology · 2025
    Article
  3. The intrinsic macrolide resistome ofAntimicrobial agents and chemotherapy · 2024
    Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Claudio MuheimArrhenius Laboratory, Department of Biochemistry and Biophysics, Stockholm University, Stockholm S-106 91, Sweden. claudio.muheim@dbb.su.se.
Amin BakaliArrhenius Laboratory, Department of Biochemistry and Biophysics, Stockholm University, Stockholm S-106 91, Sweden. aminbak@gmail.com.
Olof EngströmArrhenius Laboratory, Department of Organic Chemistry, Stockholm University, Stockholm S-106 91, Sweden. j.olof.engstrom@gmail.com.
Åke WieslanderArrhenius Laboratory, Department of Biochemistry and Biophysics, Stockholm University, Stockholm S-106 91, Sweden.
Daniel O DaleyArrhenius Laboratory, Department of Biochemistry and Biophysics, Stockholm University, Stockholm S-106 91, Sweden. ddaley@dbb.su.se.
Göran WidmalmArrhenius Laboratory, Department of Organic Chemistry, Stockholm University, Stockholm S-106 91, Sweden. goran.widmalm@su.se.
Stockholm University · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

WaaG is a glycosyltransferase that is involved in the biosynthesis of lipopolysaccharide in Gram-negative bacteria. Inhibitors of WaaG are highly sought after as they could be used to inhibit the biosynthesis of the core region of lipopolysaccharide, which would improve the uptake of antibiotics. Herein, we establish an activity assay for WaaG using (14)C-labeled UDP-glucose and LPS purified from a ∆waaG strain of Escherichia coli. We noted that addition of the lipids phosphatidylglycerol (PG) and cardiolipin (CL), as well as the detergent 3-[(3-cholamidopropyl)dimethylammonio]-1-propanesulfonate (CHAPS) increased activity. We then use the assay to determine if three molecular scaffolds, which bind to WaaG, could inhibit its activity in vitro. We show that 4-(2-amino-1,3-thiazol-4-yl)phenol inhibits WaaG (IC50 1.0 mM), but that the other scaffolds do not. This study represents an important step towards an inhibitor of WaaG by fragment-based lead discovery.

Indexed as

fragment-based lead discoveryglucosyltransferaseGram-negative bacterialipopolysaccharidescaffold

Identifiers

PMID27025525
PMCPMC4810412
OpenAlexW2281081384

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.