Evidence map›Paper›PMID 27023517›Full record

ArticleInternational journal of molecular sciences2016

Molecular Characterization of MaCCS, a Novel Copper Chaperone Gene Involved in Abiotic and Hormonal Stress Responses in Musa acuminata cv. Tianbaojiao.

Xin Feng, Fanglan Chen, Weihua Liu, Min Kyaw Thu, Zihao Zhang, Yukun Chen, Chunzhen Cheng, Yuling Lin, Tianchi Wang, Zhongxiong Lai

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed, 1 pooled it
3.4field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 1 synthesis or guideline pooled it, 18 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Xin FengInstitute of Horticultural Biotechnology, Fujian Agriculture and Forestry University, Fuzhou 350002, China. fengxin1506@163.com.
Fanglan ChenInstitute of Horticultural Biotechnology, Fujian Agriculture and Forestry University, Fuzhou 350002, China. 13459404515@163.com.
Weihua LiuInstitute of Horticultural Biotechnology, Fujian Agriculture and Forestry University, Fuzhou 350002, China. 13559216985@163.com.
Min Kyaw ThuInstitute of Horticultural Biotechnology, Fujian Agriculture and Forestry University, Fuzhou 350002, China. mktstar@gmail.com.
Zihao ZhangInstitute of Horticultural Biotechnology, Fujian Agriculture and Forestry University, Fuzhou 350002, China. zhangzihao863@126.com.
Yukun ChenInstitute of Horticultural Biotechnology, Fujian Agriculture and Forestry University, Fuzhou 350002, China. cyk68@163.com.
Chunzhen ChengInstitute of Horticultural Biotechnology, Fujian Agriculture and Forestry University, Fuzhou 350002, China. ld0532cheng@126.com.
Yuling LinInstitute of Horticultural Biotechnology, Fujian Agriculture and Forestry University, Fuzhou 350002, China. buliang84@163.com.
Tianchi WangInstitute of Horticultural Biotechnology, Fujian Agriculture and Forestry University, Fuzhou 350002, China. tianchi.wang@plantandfood.co.nz.
Zhongxiong LaiInstitute of Horticultural Biotechnology, Fujian Agriculture and Forestry University, Fuzhou 350002, China. laizx01@163.com.
Fujian Agriculture and Forestry University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Copper/zinc superoxide dismutases (Cu/ZnSODs) play important roles in improving banana resistance to adverse conditions, but their activities depend on the copper chaperone for superoxide dismutase (CCS) delivering copper to them. However, little is known about CCS in monocots and under stress conditions. Here, a novel CCS gene (MaCCS) was obtained from a banana using reverse transcription PCR and rapid-amplification of cDNA ends (RACE) PCR. Sequence analyses showed that MaCCS has typical CCS domains and a conserved gene structure like other plant CCSs. Alternative transcription start sites (ATSSs) and alternative polyadenylation contribute to the mRNA diversity of MaCCS. ATSSs in MaCCS resulted in one open reading frame containing two in-frame start codons to form two protein versions, which is supported by the MaCCS subcellular localization of in both cytosol and chloroplasts. Furthermore, MaCCS promoter was found to contain many cis-elements associated with abiotic and hormonal responses. Quantitative real-time PCR analysis showed that MaCCS was expressed in all tested tissues (leaves, pseudostems and roots). In addition, MaCCS expression was significantly induced by light, heat, drought, abscisic acid and indole-3-acetic acid, but inhibited by relatively high concentrations of CuSO₄ and under cold treatment, which suggests that MaCCS is involved in abiotic and hormonal responses.

Indexed as

3' Untranslated RegionsAbscisic AcidAmino Acid SequenceCopperGene Expression Regulation, PlantMolecular ChaperonesMolecular Sequence DataMusaPhylogenyPlant ProteinsPromoter Regions, GeneticReal-Time Polymerase Chain ReactionSequence AlignmentStress, Physiological3' Untranslated RegionsAbscisic AcidCopperMolecular ChaperonesPlant Proteinsabiotic stressexpression analysishormonal treatmentMaCCSMusa acuminata cv. Tianbaojiaopromoter

Identifiers

PMID27023517
PMCPMC4848897
OpenAlexW2305898980

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.