Evidence map›Paper›PMID 27021969›Full record

ArticleJournal of the American Chemical Society2016

Electronic Structure of the Ferryl Intermediate in the α-Ketoglutarate Dependent Non-Heme Iron Halogenase SyrB2: Contributions to H Atom Abstraction Reactivity.

Martin Srnec, Shaun D Wong, Megan L Matthews, Carsten Krebs, J Martin Bollinger, Edward I Solomon

Open access · greenAbstract read
In one paragraph

Article in Journal of the American Chemical Society, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed
6.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 91 citations in OpenAlex.

  1. Article
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  4. Review
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  6. Article
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  8. Examining Pseudohalide (NJournal of inorganic biochemistry · 2026
    Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. New Frontiers in Nonheme Enzymatic Oxyferryl Species.Chembiochem : a European journal of chemical biology · 2024
    Review
  15. Article
  16. Article
  17. Article
  18. Chemical reviews · 2024
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Martin SrnecDepartment of Chemistry, Stanford University , Stanford, California 94305-5080, United States .
Shaun D WongDepartment of Chemistry, Stanford University , Stanford, California 94305-5080, United States .
Megan L MatthewsDepartment of Chemistry, Pennsylvania State University , University Park, Pennsylvania 16802, United States.
Carsten KrebsDepartment of Chemistry, Pennsylvania State University , University Park, Pennsylvania 16802, United States.
J Martin BollingerDepartment of Chemistry, Pennsylvania State University , University Park, Pennsylvania 16802, United States.
Edward I SolomonDepartment of Chemistry, Stanford University , Stanford, California 94305-5080, United States .
Pennsylvania State University · USStanford University · USCzech Academy of Sciences, J. Heyrovský Institute of Physical Chemistry · CZ

Funding

SPECTROSCOPIC STUDIES OF NONHEME IRON ENZYMESR01GM040392 · NIGMS · STANFORD UNIVERSITY · PI SOLOMON, EDWARD I · 1988 to 2021
$8.6M
Mechanism of Taurine: Alpha-Ketoglutarate DioxygenaseR01GM069657 · NIGMS · PENNSYLVANIA STATE UNIVERSITY-UNIV PARK · PI BOLLINGER, JOSEPH M, KREBS, CARSTEN · 2004 to 2016
$2.7M
NIGMS NIH HHS R01 GM040392NIGMS NIH HHS R01GM040392NIGMS NIH HHS R01 GM069657NIGMS NIH HHS R01GM69657
6 · The paper itself

Abstract

Low temperature magnetic circular dichroism (LT MCD) spectroscopy in combination with quantum-chemical calculations are used to define the electronic structure associated with the geometric structure of the Fe(IV)═O intermediate in SyrB2 that was previously determined by nuclear resonance vibrational spectroscopy. These studies elucidate key frontier molecular orbitals (FMOs) and their contribution to H atom abstraction reactivity. The VT MCD spectra of the enzymatic S = 2 Fe(IV)═O intermediate with Br(-) ligation contain information-rich features that largely parallel the corresponding spectra of the S = 2 model complex (TMG3tren)Fe(IV)═O (Srnec, M.; Wong, S. D.; England, J; Que, L; Solomon, E. I. Proc. Natl. Acad. Sci. USA 2012, 109, 14326-14331). However, quantitative differences are observed that correlate with π-anisotropy and oxo donor strength that perturb FMOs and affect reactivity. Due to π-anisotropy, the Fe(IV)═O active site exhibits enhanced reactivity in the direction of the substrate cavity that proceeds through a π-channel that is controlled by perpendicular orientation of the substrate C-H bond relative to the halide-Fe(IV)═O plane. Also, the increased intrinsic reactivity of the SyrB2 intermediate relative to the ferryl model complex is correlated to a higher oxyl character of the Fe(IV)═O at the transition states resulting from the weaker ligand field of the halogenase.

Indexed as

Bacterial ProteinsCircular DichroismGlutaratesHydrogenIron CompoundsModels, MolecularNonheme Iron ProteinsOxidoreductasesQuantum TheoryThreonineBacterial ProteinsGlutaratesHydrogenIron CompoundsNonheme Iron ProteinsOxidoreductasessyringomycinThreonine

Identifiers

PMID27021969
PMCPMC4927264
OpenAlexW2321353488

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.