Evidence map›Paper›PMID 27021484›Full record

ArticleScientific reports2016

The Ec-NhaA antiporter switches from antagonistic to synergistic antiport upon a single point mutation.

Manish Dwivedi, Shahar Sukenik, Assaf Friedler, Etana Padan

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.1field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 19 citations in OpenAlex.

  1. Review
  2. The evolution of a NaJournal of bacteriology · 2026
    Article
  3. pH-dependent activation of the NaNature communications · 2026
    Article
  4. The evolution of a NabioRxiv : the preprint server for biology · 2026
    Article
  5. Article
  6. Article
  7. Prokaryotic NaInternational journal of molecular sciences · 2022
    Review
  8. Article
  9. An angular motion of a conserved four-helix bundle facilitates alternating access transport in the TtNapA and EcNhaA transporters.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  10. Article
  11. Replacement of Lys-300 with a glutamine in the NhaA NaThe Journal of biological chemistry · 2019
    Article
  12. Ligand-induced conformational dynamics of theProceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Manish DwivediDepartment of Biological Chemistry, Alexander Silberman Institute of Life Sciences, Givat Ram, Jerusalem-91904, Israel.
Shahar SukenikInstitute of Chemistry, the Hebrew University of Jerusalem, Edmond J. Safra Campus, Givat Ram, Jerusalem-91904, Israel.
Assaf FriedlerInstitute of Chemistry, the Hebrew University of Jerusalem, Edmond J. Safra Campus, Givat Ram, Jerusalem-91904, Israel.
Etana PadanDepartment of Biological Chemistry, Alexander Silberman Institute of Life Sciences, Givat Ram, Jerusalem-91904, Israel.
Hebrew University of Jerusalem · IL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Na(+), Li(+)/H(+) antiporter of Escherichia coli (Ec-NhaA) maintains pH, Na(+) homeostasis in enterobacteria. We used isothermal titration calorimetry to perform a detailed thermodynamic analysis of Li(+) binding to Ec-NhaA and several of its mutants. We found that, in line with the canonical alternative access mechanistic model of secondary transporters, Li(+)/H(+) binding to the antiporter is antagonistically coupled. Binding of Li(+) displaces 2 H(+) from the binding site. The process is enthalpically driven, the enthalpic gain just compensating for an entropic loss and the buffer-associated enthalpic changes dominate the overall free-energy change. Li(+) binding, H(+) release and antiporter activity were all affected to the same extent by mutations in the Li(+) binding site (D163E, D163N, D164N, D164E), while D133C changed the H(+)/Li(+) stoichiometry to 4. Most striking, however, was the mutation, A167P, which converted the Ec-NhaA antagonistic binding into synergistic binding which is only known to occur in Cl(-)/H(+) antiporter.

Indexed as

Amino Acid SubstitutionPoint MutationBinding SitesCrystallography, X-RayEscherichia coliEscherichia coli ProteinsHydrogenHydrogen-Ion ConcentrationIon TransportKineticsLithiumModels, MolecularProtein BindingProtein DomainsSodiumSodium-Hydrogen ExchangersEscherichia coli ProteinsHydrogenLithiumNhaA protein, E coliSodiumSodium-Hydrogen Exchangers

Identifiers

PMID27021484
PMCPMC4810432
OpenAlexW2320513059

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.