Evidence map›Paper›PMID 27015812›Full record

ArticleBMC musculoskeletal disorders2016

Comparison of cultures and 16S rRNA sequencing for identification of bacteria in two-stage revision arthroplasties: preliminary report.

Przemysław Bereza, Alicja Ekiel, Aleksandra Auguściak-Duma, Małgorzata Aptekorz, Iwona Wilk, Damian Kusz, Piotr Wojciechowski, Aleksander L Sieroń, Gayane Martirosian

Open access · goldAbstract readComparative Study
In one paragraph

Article in BMC musculoskeletal disorders, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed, 2 pooled it
3.1field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 2 syntheses or guidelines pooled it, 27 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Article
  4. Article
  5. Article
  6. Diagnosing Fracture-Related Infections: Where Are We Now?Journal of clinical microbiology · 2022
    Article
  7. Diagnostic Value of 16S Ribosomal RNA Gene Polymerase Chain Reaction/Sanger Sequencing in Clinical Practice.Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2021
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Przemysław BerezaDepartment of Orthopaedic and Traumatology, Medical University of Silesia, School of Medicine in Katowice, Ziołowa 45/47, Katowice, 40-635, Poland. pberez.pb@gmail.com.
Alicja EkielDepartment of Medical Microbiology, Medical University of Silesia, School of Medicine in Katowice, Katowice, Poland.
Aleksandra Auguściak-DumaDepartment of General, Molecular Biology and Genetics, Medical University of Silesia, School of Medicine in Katowice, Katowice, Poland.
Małgorzata AptekorzDepartment of Medical Microbiology, Medical University of Silesia, School of Medicine in Katowice, Katowice, Poland.
Iwona WilkDepartment of Medical Microbiology, Medical University of Silesia, School of Medicine in Katowice, Katowice, Poland.
Damian KuszDepartment of Orthopaedic and Traumatology, Medical University of Silesia, School of Medicine in Katowice, Ziołowa 45/47, Katowice, 40-635, Poland.
Piotr WojciechowskiDepartment of Orthopaedic and Traumatology, Medical University of Silesia, School of Medicine in Katowice, Ziołowa 45/47, Katowice, 40-635, Poland.
Aleksander L SierońDepartment of General, Molecular Biology and Genetics, Medical University of Silesia, School of Medicine in Katowice, Katowice, Poland.
Gayane MartirosianDepartment of Medical Microbiology, Medical University of Silesia, School of Medicine in Katowice, Katowice, Poland.
Medical University of Silesia · PLMedical University of Warsaw · PL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe use of a prefabricated spacer in two-stage revision arthroplasty remains one of the few surgery strategies for infected-joint arthroplasty treatment, despite the many unidentified microorganisms in the infected joint replacements reported in some recent studies. The aim of this prospective survey was to investigate if the sonication followed by polymerase chain reaction (PCR) can improve bacterial identification on the surfaces of prefabricated spacers and if the systemic laboratory mediators of infection and positive microbiological results can take a role of predictive factors of infection and clinical failures in 2-years follow-up.

methodsThirteen patients with prosthetic joint infection were investigated. Bacterial culture and deoxyribonucleic acid (DNA) sequencing were used to detect bacteria on the surface of prefabricated spacers removed during the second stage of revision arthroplasty. The results of pre- and intraoperative culture and DNA sequencing were compared. Minimum follow-up was 2 years.

resultsThe result of tissue cultures in second-stage revision arthroplasties revealed positive results in 15 % of patients with Coagulase-negative Staphylococci (CNS) growth. Bacterial DNA was found in over 90 % of patients with negative synovial fluid culture. Positive PCR results revealed potential pathogenic bacteria and species of human and environmental microflora with low virulence. Clinical failures at final follow-up were recorded in 2 (16.6 %) patients.

conclusionThe lack of clinical signs of infection, negative culture of preoperative joint aspirate, and intraoperative specimens do not exclude the presence of bacteria on the surfaces of spacers. The positive results of sonication and molecular tests should be interpreted as real pathogenicity factors in the light of the clinical and laboratory data, especially for patients with immunodeficiency. We confirmed our previous results that sonication followed by PCR and sequencing improved bacterial identification.

Indexed as

AgedAged, 80 and overArthroplasty, Replacement, HipArthroplasty, Replacement, KneeBacteriaBiofilmsDNA, BacterialFemaleHip ProsthesisHumansKnee ProsthesisMaleMiddle AgedPolymerase Chain ReactionPredictive Value of TestsProspective StudiesDNA, BacterialRNA, Ribosomal, 16S16S Ribosomal RNABiofilmsProsthesis-related infectionsReoperationSonication

Identifiers

PMID27015812
PMCPMC4807572
OpenAlexW2302653469

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.