Evidence map›Paper›PMID 27015791›Full record

ArticleJournal of neuroscience methods2016

Monitoring activity-dependent bulk endocytosis with the genetically-encoded reporter VAMP4-pHluorin.

Jessica C Nicholson-Fish, Karen J Smillie, Michael A Cousin

Open access · hybridAbstract read
In one paragraph

Article in Journal of neuroscience methods, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.3field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. FMRP Sustains Presynaptic Function via Control of Activity-Dependent Bulk Endocytosis.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2022
    Article
  7. Article
  8. Review
  9. Article
  10. Activity-dependent bulk endocytosis proteome reveals a key presynaptic role for the monomeric GTPase Rab11.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  11. Measuring Synaptic Vesicle Endocytosis in Cultured Hippocampal Neurons.Journal of visualized experiments : JoVE · 2017
    Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Jessica C Nicholson-FishCentre for Integrative Physiology, University of Edinburgh, Hugh Robson Building, George Square, Edinburgh EH8 9XD, Scotland, United Kingdom. Electronic address: J.Nicholson-Fish@sms.ed.ac.uk.
Karen J SmillieCentre for Integrative Physiology, University of Edinburgh, Hugh Robson Building, George Square, Edinburgh EH8 9XD, Scotland, United Kingdom. Electronic address: K.Smillie@ed.ac.uk.
Michael A CousinCentre for Integrative Physiology, University of Edinburgh, Hugh Robson Building, George Square, Edinburgh EH8 9XD, Scotland, United Kingdom. Electronic address: M.Cousin@ed.ac.uk.
University of Edinburgh · GB

Funding

Biotechnology and Biological Sciences Research CouncilMedical Research Council G1002117
6 · The paper itself

Abstract

backgroundActivity-dependent bulk endocytosis (ADBE) is the dominant mode of synaptic vesicle (SV) endocytosis during intense neuronal activity, implicating it as a major contributor to presynaptic plasticity under these stimulation conditions. However methods to monitor this endocytosis mode have been limited to either morphological or optical observation of the uptake of large fluid phase markers. NEW

methodWe present here a method to monitor ADBE using the genetically-encoded reporter VAMP4-pHluorin in primary neuronal cultures.

resultsIndividual nerve terminals expressing VAMP4-pHluorin display either an increase or decrease in fluorescence after stimulation terminates. The decrease in fluorescence reflects the slow acidification of large bulk endosomes to which VAMP4-pHluorin is selectively recruited. Use of VAMP4-pHluorin during sequential high frequency stimuli revealed that all nerve terminals perform ADBE, but not all do so in response to a single stimulus. VAMP4-pHluorin also displays a rapid activity-dependent decrease in fluorescence during high frequency stimulation, a response which is particularly prominent when expressed in hippocampal neurons. The molecular mechanism responsible for this decrease is still unclear, but is not due to loss of VAMP4-pHluorin from the nerve terminal. COMPARISON WITH EXISTING

methodsThis method allows the selective reporting of ADBE for the first time, when compared to previous approaches using markers of fluid phase uptake.

conclusionsThe development of VAMP4-pHluorin as a selective genetically-encoded reporter of ADBE increases the palette of approaches used to monitor this endocytosis mode both in vitro and in vivo.

Indexed as

Microscopy, FluorescenceAnimalsCells, CulturedCerebellumEndocytosisFemaleGreen Fluorescent ProteinsHippocampusMaleMice, Inbred C57BLNeuronsRats, Sprague-DawleyR-SNARE ProteinsSynaptic TransmissionSynaptic VesiclesSynaptophysinGreen Fluorescent ProteinsPHluorinR-SNARE ProteinsSynaptophysinClathrinEndocytosisPresynapseVAMP4Vesicle

Identifiers

PMID27015791
PMCPMC4881416
OpenAlexW2304279760

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.