Evidence map›Paper›PMID 27015744›Full record

ArticleJournal of lipid research2016

In silico modeling of the dynamics of low density lipoprotein composition via a single plasma sample.

Martin Jansen, Peter Pfaffelhuber, Michael M Hoffmann, Gerhard Puetz, Karl Winkler

Abstract read
In one paragraph

Article in Journal of lipid research, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Martin JansenInstitute of Clinical Chemistry and Laboratory Medicine, University of Freiburg, Germany martin.jansen@uniklinik-freiburg.de.
Peter PfaffelhuberMedical Center, and Department of Mathematical Stochastics, University of Freiburg, Germany.
Michael M HoffmannInstitute of Clinical Chemistry and Laboratory Medicine, University of Freiburg, Germany.
Gerhard PuetzInstitute of Clinical Chemistry and Laboratory Medicine, University of Freiburg, Germany.
Karl WinklerInstitute of Clinical Chemistry and Laboratory Medicine, University of Freiburg, Germany.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Lipoproteins play a key role in the development of CVD, but the dynamics of lipoprotein metabolism are difficult to address experimentally. This article describes a novel two-step combined in vitro and in silico approach that enables the estimation of key reactions in lipoprotein metabolism using just one blood sample. Lipoproteins were isolated by ultracentrifugation from fasting plasma stored at 4°C. Plasma incubated at 37°C is no longer in a steady state, and changes in composition may be determined. From these changes, we estimated rates for reactions like LCAT (56.3 µM/h), β-LCAT (15.62 µM/h), and cholesteryl ester (CE) transfer protein-mediated flux of CE from HDL to IDL/VLDL (21.5 µM/h) based on data from 15 healthy individuals. In a second step, we estimated LDL's HL activity (3.19 pools/day) and, for the very first time, selective CE efflux from LDL (8.39 µM/h) by relying on the previously derived reaction rates. The estimated metabolic rates were then confirmed in an independent group (n = 10). Although measurement uncertainties do not permit us to estimate parameters in individuals, the novel approach we describe here offers the unique possibility to investigate lipoprotein dynamics in various diseases like atherosclerosis or diabetes.

Indexed as

AdultAlgorithmsCholesterol Ester Transfer ProteinsComputer SimulationEsterificationFemaleHumansHydrolysisLipoproteins, LDLMaleMiddle AgedModels, BiologicalPhosphatidylcholine-Sterol O-AcyltransferaseTriglyceridesYoung AdultCETP protein, humanCholesterol Ester Transfer ProteinsLipoproteins, LDLPhosphatidylcholine-Sterol O-AcyltransferaseTriglycerideslecithin:cholesterol acyltransferaselipase/hepaticlipid transfer proteinslipoproteins/kineticslow density lipoprotein/metabolism

Identifiers

PMID27015744
PMCPMC4847624

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.