Evidence map›Paper›PMID 27015559›Full record

ArticleOncotarget2016

Methylomic predictors demonstrate the role of NF-κB in old-age mortality and are unrelated to the aging-associated epigenetic drift.

Juulia Jylhävä, Laura Kananen, Jani Raitanen, Saara Marttila, Tapio Nevalainen, Antti Hervonen, Marja Jylhä, Mikko Hurme

Abstract read
In one paragraph

Article in Oncotarget, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Clinical perspectives on the age-related increase of immunosuppressive activity.Journal of molecular medicine (Berlin, Germany) · 2022
    Review
  2. Article
  3. DNA Methylation Is Predictive of Mortality in Current and Former Smokers.American journal of respiratory and critical care medicine · 2020
    Article
  4. Article
  5. Genetic and epigenetic regulation of human aging and longevity.Biochimica et biophysica acta. Molecular basis of disease · 2019
    Review
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Juulia JylhäväDepartment of Microbiology and Immunology, School of Medicine, University of Tampere, Tampere, Finland.
Laura KananenDepartment of Microbiology and Immunology, School of Medicine, University of Tampere, Tampere, Finland.
Jani RaitanenSchool of Health Sciences, University of Tampere, Tampere, Finland.
Saara MarttilaDepartment of Microbiology and Immunology, School of Medicine, University of Tampere, Tampere, Finland.
Tapio NevalainenDepartment of Microbiology and Immunology, School of Medicine, University of Tampere, Tampere, Finland.
Antti HervonenGerontology Research Center, University of Tampere, Tampere, Finland.
Marja JylhäGerontology Research Center, University of Tampere, Tampere, Finland.
Mikko HurmeDepartment of Microbiology and Immunology, School of Medicine, University of Tampere, Tampere, Finland.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Changes in the DNA methylation (DNAm) landscape have been implicated in aging and cellular senescence. To unravel the role of specific DNAm patterns in late-life survival, we performed genome-wide methylation profiling in nonagenarians (n=111) and determined the performance of the methylomic predictors and conventional risk markers in a longitudinal setting. The survival model containing only the methylomic markers was superior in terms of predictive accuracy compared with the model containing only the conventional predictors or the model containing conventional predictors combined with the methylomic markers. At the 2.55-year follow-up, we identified 19 mortality-associated (false-discovery rate <0.5) CpG sites that mapped to genes functionally clustering around the nuclear factor kappa B (NF-κB) complex. Interestingly, none of the mortality-associated CpG sites overlapped with the established aging-associated DNAm sites. Our results are in line with previous findings on the role of NF-κB in controlling animal life spans and demonstrate the role of this complex in human longevity.

Indexed as

DNA MethylationEpigenesis, GeneticAged, 80 and overAgingCpG IslandsEpigenomicsFemaleGene Expression ProfilingGene Regulatory NetworksGenetic DriftHumansLongevityMaleModels, GeneticNF-kappa BSurvival AnalysisNF-kappa BagingCox modelGerotargetlongevitymethylationmortality

Identifiers

PMID27015559
PMCPMC4991378

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.