ArticleJournal of the American Chemical Society2016
Flexibility Coexists with Shape-Persistence in Cyanostar Macrocycles.
Article in Journal of the American Chemical Society, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.
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Who cites it
14 citing papers in PubMed, 62 citations in OpenAlex.
- π-Stacked supramolecular contact ion pairs prohibit quenching and provide control of symmetry in fluorescent dyes.Chemical science · 2026Article
- Self-assembly and Lateral Cobalt Coordination of a Fivefold Symmetric Cyanostar Macrocycle on an Au(111) Surface.Chemistry (Weinheim an der Bergstrasse, Germany) · 2026Article
- Anion Binding by Macrocyclic Receptors: Computational Landscape of 1:1 and 2:1 Stoichiometries.Journal of computational chemistry · 2025Article
- Supramolecular Control of Helicene Circularly Polarized Luminescence Emitters in Molecular Solids and Bright Nanoparticles.Angewandte Chemie (International ed. in English) · 2024Article
- GOLEM: Automated and Robust Cryo-EM-Guided Ligand Docking with Explicit Water Molecules.Journal of chemical information and modeling · 2024Article
- Solvent effects in anion recognition.Nature reviews. Chemistry · 2024Review
- Recognition competes with hydration in anion-triggered monolayer formation of cyanostar supra-amphiphiles at aqueous interfaces.Chemical science · 2022Article
- Rigidity and Flexibility in Rotaxanes and Their Relatives; On Being Stubborn and Easy-Going.Frontiers in chemistry · 2022Review
- The Chaotropic Effect as an Assembly Motif in Chemistry.Angewandte Chemie (International ed. in English) · 2018Review
- Inchworm movement of two rings switching onto a thread by biased Brownian diffusion represent a three-body problem.Proceedings of the National Academy of Sciences of the United States of America · 2018Article
- Phosphate-phosphate oligomerization drives higher order co-assemblies with stacks of cyanostar macrocycles.Chemical science · 2018Article
- CHARMM-GUI MDFF/xMDFF Utilizer for Molecular Dynamics Flexible Fitting Simulations in Various Environments.The journal of physical chemistry. B · 2017Article
- Methodology for the Simulation of Molecular Motors at Different Scales.The journal of physical chemistry. B · 2017Article
- Macrocyclic shape-persistency of cyclo[6]aramide results in enhanced multipoint recognition for the highly efficient template-directed synthesis of rotaxanes.Chemical science · 2017Article
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Authors and funding
7 authors at 2 institutions in 1 country.
Funding
Abstract
Shape-persistent macrocycles are attractive functional targets for synthesis, molecular recognition, and hierarchical self-assembly. Such macrocycles are noncollapsible and geometrically well-defined, and they are traditionally characterized by having repeat units and low conformational flexibility. Here, we find it necessary to refine these ideas in the face of highly flexible yet shape-persistent macrocycles. A molecule is shape-persistent if it has a small change in shape when perturbed by external stimuli (e.g., heat, light, and redox chemistry). In support of this idea, we provide the first examination of the relationships between a macrocycle's shape persistence, its conformational space, and the resulting functions. We do this with a star-shaped macrocycle called cyanostar that is flexible as well as being shape-persistent. We employed molecular dynamics (MD), density functional theory (DFT), and NMR experiments. Considering a thermal bath as a stimulus, we found a single macrocycle has 332 accessible conformers with olefins undergoing rapid interconversion by up-down and in-out motions on short time scales (0.2 ns). These many interconverting conformations classify single cyanostars as flexible. To determine and confirm that cyanostars are shape-persistent, we show that they have a high 87% shape similarity across these conformations. To further test the idea, we use the binding of diglyme to the single macrocycle as guest-induced stimulation. This guest has almost no effect on the conformational space. However, formation of a 2:1 sandwich complex involving two macrocycles enhances rigidity and dramatically shifts the conformer distribution toward perfect bowls. Overall, the present study expands the scope of shape-persistent macrocycles to include flexible macrocycles if, and only if, their conformers have similar shapes.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.