Evidence map›Paper›PMID 27014204›Full record

ArticleFrontiers in microbiology2016

Characterization of Novel Bacteriophages for Biocontrol of Bacterial Blight in Leek Caused by Pseudomonas syringae pv. porri.

Sofie Rombouts, Anneleen Volckaert, Sofie Venneman, Bart Declercq, Dieter Vandenheuvel, Camille N Allonsius, Cinzia Van Malderghem, Ho B Jang, Yves Briers, Jean P Noben and 4 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in microbiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 73 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
73citing papers in PubMed, 1 pooled it
9.9field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

73 citing papers in PubMed, 1 synthesis or guideline pooled it, 119 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Article
  5. Three Novel Bacteriophages for the Biocontrol ofPathogens (Basel, Switzerland) · 2025
    Article
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  7. Article
  8. Review
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  18. Article
  19. Review
  20. The role of rhizosphere phages in soil health.FEMS microbiology ecology · 2024
    Review

13 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 6 institutions in 2 countries.

Sofie RomboutsLaboratory of Gene Technology, Department of Biosystems, KU LeuvenLeuven, Belgium; Unit Plant- Crop Protection, Institute for Agricultural and Fisheries ResearchMerelbeke, Belgium.
Anneleen VolckaertVegetable Research Centre (PCG) Kruishoutem, Belgium.
Sofie VennemanResearch Station for Vegetable Production Sint-Katelijne-Waver, Belgium.
Bart DeclercqInagro Rumbeke, Belgium.
Dieter VandenheuvelLaboratory of Applied Microbiology and Biotechnology, Department of Bioscience Engineering, University of Antwerp Antwerpen, Belgium.
Camille N AllonsiusLaboratory of Applied Microbiology and Biotechnology, Department of Bioscience Engineering, University of Antwerp Antwerpen, Belgium.
Cinzia Van MalderghemUnit Plant- Crop Protection, Institute for Agricultural and Fisheries Research Merelbeke, Belgium.
Ho B JangLaboratory of Gene Technology, Department of Biosystems, KU Leuven Leuven, Belgium.
Yves BriersLaboratory of Gene Technology, Department of Biosystems, KU LeuvenLeuven, Belgium; Laboratory of Applied Biotechnology, Department of Applied Biosciences, Ghent UniversityGhent, Belgium.
Jean P NobenSchool of Life Sciences, Biomedical Research Institute and Transnational University Limburg, Hasselt University Diepenbeek, Belgium.
Jochen KlumppInstitute of Food, Nutrition and Health, ETH Zurich Zurich, Switzerland.
Johan Van VaerenberghUnit Plant- Crop Protection, Institute for Agricultural and Fisheries Research Merelbeke, Belgium.
Martine MaesUnit Plant- Crop Protection, Institute for Agricultural and Fisheries ResearchMerelbeke, Belgium; Lab. of Microbiology, Department of Biochemistry and Microbiology, Ghent UniversityGent, Belgium.
Rob LavigneLaboratory of Gene Technology, Department of Biosystems, KU Leuven Leuven, Belgium.
KU Leuven · BEGhent University · BEUniversity of Antwerp · BEETH Zurich · CHInagro (Belgium) · BETransnational University Limburg · BE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Pseudomonas syringae pv. porri, the causative agent of bacterial blight in leek (Allium porrum), is increasingly frequent causing problems in leek cultivation. Because of the current lack of control measures, novel bacteriophages were isolated to control this pathogen using phage therapy. Five novel phages were isolated from infected fields in Flanders (vB_PsyM_KIL1, vB_PsyM_KIL2, vB_PsyM_KIL3, vB_PsyM_KIL4, and vB_PsyM_KIL5), and were complemented with one selected host range mutant phage (vB_PsyM_KIL3b). Genome analysis of the phages revealed genome sizes between 90 and 94 kb and an average GC-content of 44.8%. Phylogenomic networking classified them into a novel clade, named the "KIL-like viruses," related to the Felixounalikevirus genus, together with phage phiPsa374 from P. syringae pv. actinidiae. In vitro characterization demonstrated the stability and lytic potential of these phages. Host range analysis confirmed heterogeneity within P. syringae pv. porri, leading to the development of a phage cocktail with a range that covers the entire set of 41 strains tested. Specific bio-assays demonstrated the in planta efficacy of phages vB_PsyM_KIL1, vB_PsyM_KIL2, vB_PsyM_KIL3, and vB_PsyM_KIL3b. In addition, two parallel field trial experiments on three locations using a phage cocktail of the six phages showed variable results. In one trial, symptom development was attenuated. These data suggest some potential for phage therapy in controlling bacterial blight of leek, pending optimization of formulation and application methods.

Indexed as

KIL-like virusesleek bacterial blightphage therapyphylogenomicsPseudomonas syringae pv. porri

Identifiers

PMID27014204
PMCPMC4791379
OpenAlexW2312974550

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.