Evidence map›Paper›PMID 27013549›Full record

ArticleDNA research : an international journal for rapid publication of reports on genes and genomes2016

High-density linkage mapping and distribution of segregation distortion regions in the oak genome.

Catherine Bodénès, Emilie Chancerel, François Ehrenmann, Antoine Kremer, Christophe Plomion

Abstract read
In one paragraph

Article in DNA research : an international journal for rapid publication of reports on genes and genomes, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed.

  1. Article
  2. Article
  3. Response of Pedunculate Oak (Plants (Basel, Switzerland) · 2025
    Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Construction of a High-Density Genetic Map ofFrontiers in plant science · 2021
    Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. A novel high-density grapevine (Vitis vinifera L.) integrated linkage map using GBS in a half-diallel population.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2019
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Catherine BodénèsINRA, UMR1202 BIOGECO, F-33610 Cestas, France Université de Bordeaux, UMR1202 BIOGECO, F-33610 Talence, France catherine.bodenes@pierroton.inra.fr.
Emilie ChancerelINRA, UMR1202 BIOGECO, F-33610 Cestas, France Université de Bordeaux, UMR1202 BIOGECO, F-33610 Talence, France.
François EhrenmannINRA, UMR1202 BIOGECO, F-33610 Cestas, France Université de Bordeaux, UMR1202 BIOGECO, F-33610 Talence, France.
Antoine KremerINRA, UMR1202 BIOGECO, F-33610 Cestas, France Université de Bordeaux, UMR1202 BIOGECO, F-33610 Talence, France.
Christophe PlomionINRA, UMR1202 BIOGECO, F-33610 Cestas, France Université de Bordeaux, UMR1202 BIOGECO, F-33610 Talence, France.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We developed the densest single-nucleotide polymorphism (SNP)-based linkage genetic map to date for the genus Quercus An 8k gene-based SNP array was used to genotype more than 1,000 full-sibs from two intraspecific and two interspecific full-sib families of Quercus petraea and Quercus robur A high degree of collinearity was observed between the eight parental maps of the two species. A composite map was then established with 4,261 SNP markers spanning 742 cM over the 12 linkage groups (LGs) of the oak genome. Nine genomic regions from six LGs displayed highly significant distortions of segregation. Two main hypotheses concerning the mechanisms underlying segregation distortion are discussed: genetic load vs. reproductive barriers. Our findings suggest a predominance of pre-zygotic to post-zygotic barriers.

Indexed as

Chromosome MappingGenome, PlantPolymorphism, Single NucleotideGenetic LinkageQuercushigh-density linkage mapQuercusreproductive barrierssegregation distortionSNP

Identifiers

PMID27013549
PMCPMC4833419

What OpenQuestion holds

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LicenceCC BY-NC
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.