Evidence map›Paper›PMID 27013241›Full record

ArticleDevelopment (Cambridge, England)2016

Regional signals in the planarian body guide stem cell fate in the presence of genomic instability.

T Harshani Peiris, Daniel Ramirez, Paul G Barghouth, Udokanma Ofoha, Devon Davidian, Frank Weckerle, Néstor J Oviedo

Abstract read
In one paragraph

Article in Development (Cambridge, England), 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed.

  1. The In Vitro Enhancement of Retinal Cell Viability via mInternational journal of molecular sciences · 2024
    Article
  2. Article
  3. Article
  4. Purification of Planarian Stem Cells Using a Draq5-Based FACS Approach.Methods in molecular biology (Clifton, N.J.) · 2024
    Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Analysis of DNA Double-Stranded Breaks Using the Comet Assay in Planarians.Methods in molecular biology (Clifton, N.J.) · 2022
    Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Poly(ADP-Ribose) Polymerase-3 Regulates Regeneration in Planarians.International journal of molecular sciences · 2020
    Article
  16. eLife · 2020
    Article
  17. Article
  18. DNA damage and tissue repair: What we can learn from planaria.Seminars in cell & developmental biology · 2019
    Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

T Harshani PeirisDepartment of Molecular and Cell Biology, School of Natural Sciences, University of California, Merced, CA 95343, USA Quantitative and Systems Biology Graduate Program, University of California, Merced, CA 95343, USA.
Daniel RamirezDepartment of Molecular and Cell Biology, School of Natural Sciences, University of California, Merced, CA 95343, USA Quantitative and Systems Biology Graduate Program, University of California, Merced, CA 95343, USA.
Paul G BarghouthDepartment of Molecular and Cell Biology, School of Natural Sciences, University of California, Merced, CA 95343, USA Quantitative and Systems Biology Graduate Program, University of California, Merced, CA 95343, USA.
Udokanma OfohaDepartment of Molecular and Cell Biology, School of Natural Sciences, University of California, Merced, CA 95343, USA Quantitative and Systems Biology Graduate Program, University of California, Merced, CA 95343, USA.
Devon DavidianDepartment of Molecular and Cell Biology, School of Natural Sciences, University of California, Merced, CA 95343, USA Quantitative and Systems Biology Graduate Program, University of California, Merced, CA 95343, USA.
Frank WeckerleDepartment of Molecular and Cell Biology, School of Natural Sciences, University of California, Merced, CA 95343, USA.
Néstor J OviedoDepartment of Molecular and Cell Biology, School of Natural Sciences, University of California, Merced, CA 95343, USA Quantitative and Systems Biology Graduate Program, University of California, Merced, CA 95343, USA Health Sciences Research Institute, University of California, Merced, CA 95343, USA noviedo2@ucmerced.edu.ORCID 0000-0002-0213-9781

Funding

Molecular mechanisms controlling cell proliferation during tissue turnover and caR21CA176114 · NCI · UNIVERSITY OF CALIFORNIA, MERCED · PI OVIEDO, NESTOR J · 2014 to 2015
$361k
Genetic regulation of stem cell behavior in planariansR15GM109372 · NIGMS · UNIVERSITY OF CALIFORNIA, MERCED · PI OVIEDO, NESTOR J · 2014 to 2014
$352k
NCI NIH HHS R21 CA176114NIGMS NIH HHS R15 GM109372
6 · The paper itself

Abstract

Cellular fate decisions are influenced by their topographical location in the adult body. For instance, tissue repair and neoplastic growth are greater in anterior than in posterior regions of adult animals. However, the molecular underpinnings of these regional differences are unknown. We identified a regional switch in the adult planarian body upon systemic disruption of homologous recombination with RNA-interference of Rad51 Rad51 knockdown increases DNA double-strand breaks (DSBs) throughout the body, but stem cells react differently depending on their location along the anteroposterior axis. In the presence of extensive DSBs, cells in the anterior part of the body resist death, whereas cells in the posterior region undergo apoptosis. Furthermore, we found that proliferation of cells with DNA damage is induced in the presence of brain tissue and that the retinoblastoma pathway enables overproliferation of cells with DSBs while attending to the demands of tissue growth and repair. Our results implicate both autonomous and non-autonomous mechanisms as key mediators of regional cell behavior and cellular transformation in the adult body.

Indexed as

Cell LineageGenomic InstabilityAnimalsBody PatterningCell DeathCell DifferentiationCell DivisionCell ProliferationDNADNA Breaks, Double-StrandedDNA DamageDNA End-Joining RepairDown-RegulationGamma RaysHomologous RecombinationOrgan SpecificityDNARad51 RecombinaseRetinoblastoma ProteinDNA damageNeoblastPlanarianRad51Stem cells

Identifiers

PMID27013241
PMCPMC4874482

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.