Evidence map›Paper›PMID 27012867›Full record

ArticleJournal of insect science (Online)2016

Virtual Screening of Plant Volatile Compounds Reveals a High Affinity of Hylamorpha elegans (Coleoptera: Scarabaeidae) Odorant-Binding Proteins for Sesquiterpenes From Its Native Host.

Angélica González-González, Rubén Palma-Millanao, Osvaldo Yáñez, Maximiliano Rojas, Ana Mutis, Herbert Venthur, Andrés Quiroz, Claudio C Ramírez

Open access · goldAbstract read
In one paragraph

Article in Journal of insect science (Online), 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.5field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 26 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Angélica González-GonzálezMillennium Nucleus Centre in Molecular Ecology and Evolutionary Applications in Agroecosystems, Instituto de Ciencias Biológicas, Universidad de Talca, 2 Norte 685, Talca, Chile (angelica.gonzalez@utalca.cl; rupalma@utalca.cl; clramirez@utalca.cl), rupalma@utalca.cl.
Rubén Palma-MillanaoMillennium Nucleus Centre in Molecular Ecology and Evolutionary Applications in Agroecosystems, Instituto de Ciencias Biológicas, Universidad de Talca, 2 Norte 685, Talca, Chile (angelica.gonzalez@utalca.cl; rupalma@utalca.cl; clramirez@utalca.cl), rupalma@utalca.cl.
Osvaldo YáñezDoctorado en Fisicoquímica Molecular, Facultad de Ciencias Exactas, Universidad Andrés Bello, República 275, Santiago, Chile (osvyanezosses@gmail.com).
Maximiliano RojasInstituto de Ciencias Biológicas, Universidad de Talca, Dos Norte 685, 3465548 Talca, Chile (mrojasr@alumnos.utalca.cl), and.
Ana MutisLaboratorio de Ecología Química, Departamento de Ciencias Químicas y Recursos Naturales, Universidad de La Frontera, Av. Francisco Salazar, 01145 Temuco, Chile (ana.mutis@ufrontera.cl; h.venthur01@ufromail.cl; andres.quiroz@ufrontera.cl).
Herbert VenthurLaboratorio de Ecología Química, Departamento de Ciencias Químicas y Recursos Naturales, Universidad de La Frontera, Av. Francisco Salazar, 01145 Temuco, Chile (ana.mutis@ufrontera.cl; h.venthur01@ufromail.cl; andres.quiroz@ufrontera.cl).
Andrés QuirozLaboratorio de Ecología Química, Departamento de Ciencias Químicas y Recursos Naturales, Universidad de La Frontera, Av. Francisco Salazar, 01145 Temuco, Chile (ana.mutis@ufrontera.cl; h.venthur01@ufromail.cl; andres.quiroz@ufrontera.cl).
Claudio C RamírezMillennium Nucleus Centre in Molecular Ecology and Evolutionary Applications in Agroecosystems, Instituto de Ciencias Biológicas, Universidad de Talca, 2 Norte 685, Talca, Chile (angelica.gonzalez@utalca.cl; rupalma@utalca.cl; clramirez@utalca.cl).
Universidad de La Frontera · CLUniversity of Talca · CLLaboratoire Physiologie Cellulaire & Végétale · FRUniversidad Andrés Bello · CL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Hylamorpha elegans(Burmeister) is a native Chilean scarab beetle considered to be a relevant agricultural pest to pasture and cereal and small fruit crops. Because of their cryptic habits, control with conventional methods is difficult; therefore, alternative and environmentally friendly control strategies are highly desirable. The study of proteins that participate in the recognition of odorants, such as odorant-binding proteins (OBPs), offers interesting opportunities to identify new compounds with the potential to modify pest behavior and computational screening of compounds, which is commonly used in drug discovery, may help to accelerate the discovery of new semiochemicals. Here, we report the discovery of four OBPs inH. elegans as well as six new volatiles released by its native host Nothofagus obliqua(Mirbel). Molecular docking performed between OBPs and new and previously reported volatiles from N. oblique revealed the best binding energy values for sesquiterpenic compounds. Despite remarkable divergence at the amino acid level, three of the four OBPs evaluated exhibited the best interaction energy for the same ligands. Molecular dynamics investigation reinforced the importance of sesquiterpenes, showing that hydrophobic residues of the OBPs interacted most frequently with the tested ligands, and binding free energy calculations demonstrated van der Waals and hydrophobic interactions to be the most important. Altogether, the results suggest that sesquiterpenes are interesting candidates for in vitro and in vivo assays to assess their potential application in pest management strategies.

Indexed as

AnimalsBase SequenceColeopteraFagaceaeFemaleLigandsMaleMolecular Docking SimulationMolecular Sequence DataPest Control, BiologicalPolymerase Chain ReactionReceptors, OdorantSesquiterpenesVolatile Organic CompoundsLigandsReceptors, OdorantSesquiterpenesVolatile Organic Compoundsinsect olfactionMM/GBSAmolecular dynamicsNothofagus obliquaprotein prediction

Identifiers

PMID27012867
PMCPMC4806717
OpenAlexW2310049989

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.