Evidence map›Paper›PMID 27011170›Full record

ReviewInternational journal of molecular sciences2016

LARP6 Meets Collagen mRNA: Specific Regulation of Type I Collagen Expression.

Yujie Zhang, Branko Stefanovic

Open access · goldAbstract readReview
In one paragraph

Review in International journal of molecular sciences, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 55 papers.

0numbers the graph read from it
0cells of the map it votes in
55citing papers in PubMed
2.9field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

55 citing papers in PubMed, 100 citations in OpenAlex.

  1. Article
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  10. LARP6-mediated cardiomyocyte-fibroblast signaling prevents hypertension-induced cardiac dysfunction.American journal of physiology. Heart and circulatory physiology · 2025
    Article
  11. Article
  12. Review
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  15. Biomolecular NMR assignments · 2025
    Article
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  18. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Yujie ZhangDepartment of Biomedical Sciences, College of Medicine, Florida State University, Tallahassee, FL 32306, USA. yujie.zhang@med.fsu.edu.
Branko StefanovicDepartment of Biomedical Sciences, College of Medicine, Florida State University, Tallahassee, FL 32306, USA. branko.stefanovic@med.fsu.edu.
Florida State University · US

Funding

Regulation of Type I Collagen in Hepatic FibrosisR01DK059466 · NIDDK · UNIVERSITY OF NORTH CAROLINA CHAPEL HILL · PI STEFANOVIC, BRANKO · 2002 to 2012
$2.4M
NIDDK NIH HHS 5R01DK059466-11NIDDK NIH HHS R01 DK059466
6 · The paper itself

Abstract

Type I collagen is the most abundant structural protein in all vertebrates, but its constitutive rate of synthesis is low due to long half-life of the protein (60-70 days). However, several hundred fold increased production of type I collagen is often seen in reparative or reactive fibrosis. The mechanism which is responsible for this dramatic upregulation is complex, including multiple levels of regulation. However, posttranscriptional regulation evidently plays a predominant role. Posttranscriptional regulation comprises processing, transport, stabilization and translation of mRNAs and is executed by RNA binding proteins. There are about 800 RNA binding proteins, but only one, La ribonucleoprotein domain family member 6 (LARP6), is specifically involved in type I collagen regulation. In the 5'untranslated region (5'UTR) of mRNAs encoding for type I and type III collagens there is an evolutionally conserved stem-loop (SL) structure; this structure is not found in any other mRNA, including any other collagen mRNA. LARP6 binds to the 5'SL in sequence specific manner to regulate stability of collagen mRNAs and their translatability. Here, we will review current understanding of how is LARP6 involved in posttranscriptional regulation of collagen mRNAs. We will also discuss how other proteins recruited by LARP6, including nonmuscle myosin, vimentin, serine threonine kinase receptor associated protein (STRAP), 25 kD FK506 binding protein (FKBP25) and RNA helicase A (RHA), contribute to this process.

Indexed as

RNA Processing, Post-TranscriptionalAnimalsAutoantigensCollagen Type IHumansProtein BindingRibonucleoproteinsRNA, MessengerRNA StabilitySS-B AntigenAutoantigensCollagen Type IRibonucleoproteinsRNA, MessengerSS-B Antigencollagen mRNA binding proteincollagen mRNA translationLARP6posttranscriptional regulationribonucleoprotein complexestype I collagen

Identifiers

PMID27011170
PMCPMC4813270
OpenAlexW2308478592

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.