Evidence map›Paper›PMID 27008969›Full record

ArticleNature2016

Melanoma addiction to the long non-coding RNA SAMMSON.

Eleonora Leucci, Roberto Vendramin, Marco Spinazzi, Patrick Laurette, Mark Fiers, Jasper Wouters, Enrico Radaelli, Sven Eyckerman, Carina Leonelli, Katrien Vanderheyden and 14 more

Open access · greenAbstract read
PubMed Publisher
In one paragraph

Article in Nature, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 353 papers.

0numbers the graph read from it
0cells of the map it votes in
353citing papers in PubMed
28.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

353 citing papers in PubMed, 583 citations in OpenAlex.

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  15. Review
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  18. Identification of Long Noncoding RNA by In Situ Hybridization Approaches.Methods in molecular biology (Clifton, N.J.) · 2026
    Article
  19. Review
  20. Article

293 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

24 authors at 7 institutions in 2 countries.

Eleonora LeucciLaboratory For Molecular Cancer Biology, Center for Human Genetics, KULeuven, Herestraat 49, 3000 Leuven, Belgium.
Roberto VendraminLaboratory For Molecular Cancer Biology, Center for Human Genetics, KULeuven, Herestraat 49, 3000 Leuven, Belgium.
Marco SpinazziCenter for the Biology of Disease, VIB, Herestraat 49, 3000 Leuven, Belgium.
Patrick LauretteInstitut de Génétique et de Biologie Moleculaire et Cellulaire (IGBMC), Rue Laurent Fries 1, 67404 Illkirch, France.
Mark FiersCenter for the Biology of Disease, VIB, Herestraat 49, 3000 Leuven, Belgium.
Jasper WoutersLaboratory of Translational Cell and Tissue Research, Department of Pathology, KULeuven and UZ Leuven, Herestraat 49, 3000 Leuven, Belgium.
Enrico RadaelliMouse Histopathology Core Facility, Center for the Biology of Disease, VIB-KULeuven, Herestraat 49, 3000 Leuven, Belgium.
Sven EyckermanMedical Biotechnology Center, VIB, Albert Baertsoenkaai 3, 9000 Gent, Belgium.
Carina LeonelliCenter for Medical Genetics, Gent University, De Pintelaan 185, 9000 Gent, Belgium.
Katrien VanderheydenCenter for Medical Genetics, Gent University, De Pintelaan 185, 9000 Gent, Belgium.
Aljosja RogiersLaboratory For Molecular Cancer Biology, Center for Human Genetics, KULeuven, Herestraat 49, 3000 Leuven, Belgium.
Els HermansGynaecologische Oncologie, KU Leuven, Herestraat 49, 3000 Leuven, Belgium.
Pieter BaatsenCenter for the Biology of Disease, VIB, Herestraat 49, 3000 Leuven, Belgium.
Stein AertsLaboratory of Computational Biology, Center for Human Genetics, KULeuven, Herestraat 49, 3000 Leuven, Belgium.
Frederic AmantGynaecologische Oncologie, KU Leuven, Herestraat 49, 3000 Leuven, Belgium.
Stefan Van AelstDepartment of Applied Mathematics, Computer Science and Statistics, Gent University, De Pintelaan 185, 9000 Gent, Belgium.
Joost van den OordLaboratory of Translational Cell and Tissue Research, Department of Pathology, KULeuven and UZ Leuven, Herestraat 49, 3000 Leuven, Belgium.
Bart de StrooperCenter for the Biology of Disease, VIB, Herestraat 49, 3000 Leuven, Belgium.
Irwin DavidsonInstitut de Génétique et de Biologie Moleculaire et Cellulaire (IGBMC), Rue Laurent Fries 1, 67404 Illkirch, France.
Denis L J LafontaineRNA Molecular Biology, Center for Microscopy and Molecular Imaging, Université Libre de Bruxelles (ULB), rue des Professeurs Jeener et Brachet 12, 6041 Charleroi, Belgium.
Kris GevaertMedical Biotechnology Center, VIB, Albert Baertsoenkaai 3, 9000 Gent, Belgium.
Jo VandesompeleCenter for Medical Genetics, Gent University, De Pintelaan 185, 9000 Gent, Belgium.
Pieter MestdaghCenter for Medical Genetics, Gent University, De Pintelaan 185, 9000 Gent, Belgium.
Jean-Christophe MarineLaboratory For Molecular Cancer Biology, Center for Human Genetics, KULeuven, Herestraat 49, 3000 Leuven, Belgium.
VIB-KU Leuven Center for Cancer Biology · BEKU Leuven · BEGhent University Hospital · BEGhent University · BEInstitut de génétique et de biologie moléculaire et cellulaire · FRUniversité Libre de Bruxelles · BEVIB-UGent Center for Medical Biotechnology · BE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Focal amplifications of chromosome 3p13-3p14 occur in about 10% of melanomas and are associated with a poor prognosis. The melanoma-specific oncogene MITF resides at the epicentre of this amplicon. However, whether other loci present in this amplicon also contribute to melanomagenesis is unknown. Here we show that the recently annotated long non-coding RNA (lncRNA) gene SAMMSON is consistently co-gained with MITF. In addition, SAMMSON is a target of the lineage-specific transcription factor SOX10 and its expression is detectable in more than 90% of human melanomas. Whereas exogenous SAMMSON increases the clonogenic potential in trans, SAMMSON knockdown drastically decreases the viability of melanoma cells irrespective of their transcriptional cell state and BRAF, NRAS or TP53 mutational status. Moreover, SAMMSON targeting sensitizes melanoma to MAPK-targeting therapeutics both in vitro and in patient-derived xenograft models. Mechanistically, SAMMSON interacts with p32, a master regulator of mitochondrial homeostasis and metabolism, to increase its mitochondrial targeting and pro-oncogenic function. Our results indicate that silencing of the lineage addiction oncogene SAMMSON disrupts vital mitochondrial functions in a cancer-cell-specific manner; this silencing is therefore expected to deliver highly effective and tissue-restricted anti-melanoma therapeutic responses.

Indexed as

AnimalsCarcinogenesisCarrier ProteinsCell LineageCell ProliferationCell SurvivalChromosomes, Human, Pair 3Clone CellsFemaleGene AmplificationGene Knockdown TechniquesHumansMelanomaMiceMicrophthalmia-Associated Transcription FactorMitochondriaC1QBP protein, humanCarrier ProteinsMicrophthalmia-Associated Transcription FactorMITF protein, humanMitochondrial ProteinsMitogen-Activated Protein KinasesRNA, Long NoncodingSOXE Transcription Factors

Identifiers

PMID27008969
OpenAlexW2311921258

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.