ReviewJournal of clinical microbiology2016
Practical Value of Food Pathogen Traceability through Building a Whole-Genome Sequencing Network and Database.
Review in Journal of clinical microbiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 193 papers, 1 of them a synthesis that pooled it.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
193 citing papers in PubMed, 1 synthesis or guideline pooled it.
- Molecular Epidemiology and AMR Perspective of Diarrhoeagenic Escherichia coli in Africa: A Systematic Review and Meta-analysis.Journal of epidemiology and global health · 2024Pooled it
- Genomic architecture of antimicrobial resistance and mobile genetic elements inMicrobiology spectrum · 2026Article
- Antibiotic Resistance Genes in Salmonella Isolates from Food Production Environments and Clinical Sources in the Middle East: A Systematic Review and Meta-Analysis Revealing the Limited Comparative Genomic Evidence.Life (Basel, Switzerland) · 2026Review
- Pathogen to read: a rapid, automated workflow for public health-ready microbial sequencing.BMC genomics · 2026Article
- Horizontal Gene Transfer inBiology · 2026Review
- Genomic Epidemiology of FoodborneAntibiotics (Basel, Switzerland) · 2026Article
- High acceptability of a national platform for public health genomic data sharing and surveillance in Australia: a mixed methods study.BMC global and public health · 2026Article
- Probing Genomic Diversity ofFoods (Basel, Switzerland) · 2026Article
- Review
- Antimicrobial Resistance in the Food Chain: Bridging Knowledge Gaps for Effective Detection and Control.Antibiotics (Basel, Switzerland) · 2026Review
- Genomic surveillance ofMicrobial genomics · 2026Article
- Large-volume sampling for improved characterization of microbial contamination in agricultural waters: a case study from southeastern U.S. produce farms.Journal of water and health · 2026Article
- Multidrug-resistantFrontiers in microbiology · 2026Article
- Epidemiology, antimicrobial resistance transmission, and One Health-based prevention of non-typhoidalFrontiers in microbiology · 2026Review
- Optimizing data-driven excellence: Canada's approach to using pathogen test datasets for quality control, pipeline development and training initiatives.Microbial genomics · 2026Article
- Environmental pollutants as modifiers of antimicrobial resistance risk across food systems: a One Health perspective.Frontiers in public health · 2026Review
- Describing the outcomes and factors of using pathogen genomic results in public health.Frontiers in public health · 2026Article
- Detection, Genomic Characterization, and Antibiotic Susceptibility ofFoods (Basel, Switzerland) · 2025Article
- Phenotypic and genotypic characterisation of Salmonella serovars from poultry in ilorin, Kwara state, Nigeria.BMC microbiology · 2025Article
- PapB Family Regulators as Master Switches of Fimbrial Expression.Microorganisms · 2025Review
133 more citing papers are in PubMed but not listed here.
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
7 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The FDA has created a United States-based open-source whole-genome sequencing network of state, federal, international, and commercial partners. The GenomeTrakr network represents a first-of-its-kind distributed genomic food shield for characterizing and tracing foodborne outbreak pathogens back to their sources. The GenomeTrakr network is leading investigations of outbreaks of foodborne illnesses and compliance actions with more accurate and rapid recalls of contaminated foods as well as more effective monitoring of preventive controls for food manufacturing environments. An expanded network would serve to provide an international rapid surveillance system for pathogen traceback, which is critical to support an effective public health response to bacterial outbreaks.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.