Evidence map›Paper›PMID 27008349›Full record

ArticlePhysics in medicine and biology2016

Robust breathing signal extraction from cone beam CT projections based on adaptive and global optimization techniques.

Ming Chao, Jie Wei, Tianfang Li, Yading Yuan, Kenneth E Rosenzweig, Yeh-Chi Lo

Open access · greenAbstract read
In one paragraph

Article in Physics in medicine and biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 19 citations in OpenAlex.

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  6. A constrained linear regression optimization algorithm for diaphragm motion tracking with cone beam CT projections.Physica medica : PM : an international journal devoted to the applications of physics to medicine and biology : official journal of the Italian Association of Biomedical Physics (AIFB) · 2018
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Ming ChaoDepartment of Radiation Oncology, Mount Sinai Medical Center, New York, NY 10029, USA.
Jie WeiDepartment of Computer Science, City College of New York, New York, NY 10031, USA.
Tianfang LiDepartment of Radiation Oncology, University of Pittsburgh Medical Center, Pittsburgh, PA 15232, USA.
Yading YuanDepartment of Radiation Oncology, Mount Sinai Medical Center, New York, NY 10029, USA.
Kenneth E RosenzweigDepartment of Radiation Oncology, Mount Sinai Medical Center, New York, NY 10029, USA.
Yeh-Chi LoDepartment of Radiation Oncology, Mount Sinai Medical Center, New York, NY 10029, USA.
Mount Sinai Medical Center · USCity College of New York · USUniversity of Pittsburgh Medical Center · US

Funding

Training and Career Development CoreU54CA132378 · NCI · CITY COLLEGE OF NEW YORK · PI Tim Alan Ahles, ADRIANA ESPINOSA · 2008 to 2026
$28.9M
Training and Career Development and Education CoreU54CA137788 · NCI · SLOAN-KETTERING INST CAN RESEARCH · PI Daniel Alan Heller · 2008 to 2026
$28.1M
NCI NIH HHS U54 CA132378NCI NIH HHS U54CA132378-8NCI NIH HHS U54 CA137788
6 · The paper itself

Abstract

We present a study of extracting respiratory signals from cone beam computed tomography (CBCT) projections within the framework of the Amsterdam Shroud (AS) technique. Acquired prior to the radiotherapy treatment, CBCT projections were preprocessed for contrast enhancement by converting the original intensity images to attenuation images with which the AS image was created. An adaptive robust z-normalization filtering was applied to further augment the weak oscillating structures locally. From the enhanced AS image, the respiratory signal was extracted using a two-step optimization approach to effectively reveal the large-scale regularity of the breathing signals. CBCT projection images from five patients acquired with the Varian Onboard Imager on the Clinac iX System Linear Accelerator (Varian Medical Systems, Palo Alto, CA) were employed to assess the proposed technique. Stable breathing signals can be reliably extracted using the proposed algorithm. Reference waveforms obtained using an air bellows belt (Philips Medical Systems, Cleveland, OH) were exported and compared to those with the AS based signals. The average errors for the enrolled patients between the estimated breath per minute (bpm) and the reference waveform bpm can be as low as -0.07 with the standard deviation 1.58. The new algorithm outperformed the original AS technique for all patients by 8.5% to 30%. The impact of gantry rotation on the breathing signal was assessed with data acquired with a Quasar phantom (Modus Medical Devices Inc., London, Canada) and found to be minimal on the signal frequency. The new technique developed in this work will provide a practical solution to rendering markerless breathing signal using the CBCT projections for thoracic and abdominal patients.

Indexed as

AlgorithmsPhantoms, ImagingRespirationCone-Beam Computed TomographyHumansImage Processing, Computer-AssistedRotation

Identifiers

PMID27008349
PMCPMC5386324
OpenAlexW2327627879

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.