Evidence map›Paper›PMID 27007846›Full record

ArticleNature2016

Structure of promoter-bound TFIID and model of human pre-initiation complex assembly.

Robert K Louder, Yuan He, José Ramón López-Blanco, Jie Fang, Pablo Chacón, Eva Nogales

Erratum issuedOpen access · greenAbstract readVideo-Audio Media
In one paragraph

Article in Nature, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 154 papers.

0numbers the graph read from it
0cells of the map it votes in
154citing papers in PubMed
19.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

154 citing papers in PubMed, 235 citations in OpenAlex.

  1. Article
  2. The molecular basis of transcription initiation by RNA polymerase II.Nature reviews. Molecular cell biology · 2026
    Review
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94 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Robert K LouderBiophysics Graduate Group, University of California, Berkeley, California 94720, USA.
Yuan HeQB3 Institute, Department of Molecular and Cell Biology, University of California, Berkeley, California 94720, USA.
José Ramón López-BlancoDepartment of Biological Physical Chemistry, Rocasolano Physical Chemistry Institute, CSIC, Serrano 119, Madrid 28006, Spain.
Jie FangHoward Hughes Medical Institute, University of California, Berkeley, California 94720, USA.
Pablo ChacónDepartment of Biological Physical Chemistry, Rocasolano Physical Chemistry Institute, CSIC, Serrano 119, Madrid 28006, Spain.
Eva NogalesQB3 Institute, Department of Molecular and Cell Biology, University of California, Berkeley, California 94720, USA.
Instituto de Química Física Blas Cabrera · ESLawrence Berkeley National Laboratory · USUniversity of California, Berkeley · US

Funding

MOLECULAR BIOPHYSICS TRAINING GRANTT32GM008295 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI HURLEY, JAMES H, WEMMER, DAVID E · 1989 to 2022
$8.1M
Structural Studies of the Eukaryotic Transcription Initiation MachineryR01GM063072 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI NOGALES, EVA · 2001 to 2016
$2.5M
Howard Hughes Medical InstituteNIGMS NIH HHS GM008295NIGMS NIH HHS GM63072NIGMS NIH HHS R01 GM063072NIGMS NIH HHS T32 GM008295
6 · The paper itself

Abstract

The general transcription factor IID (TFIID) plays a central role in the initiation of RNA polymerase II (Pol II)-dependent transcription by nucleating pre-initiation complex (PIC) assembly at the core promoter. TFIID comprises the TATA-binding protein (TBP) and 13 TBP-associated factors (TAF1-13), which specifically interact with a variety of core promoter DNA sequences. Here we present the structure of human TFIID in complex with TFIIA and core promoter DNA, determined by single-particle cryo-electron microscopy at sub-nanometre resolution. All core promoter elements are contacted by subunits of TFIID, with TAF1 and TAF2 mediating major interactions with the downstream promoter. TFIIA bridges the TBP-TATA complex with lobe B of TFIID. We also present the cryo-electron microscopy reconstruction of a fully assembled human TAF-less PIC. Superposition of common elements between the two structures provides novel insights into the general role of TFIID in promoter recognition, PIC assembly, and transcription initiation.

Indexed as

Transcription Initiation, GeneticCryoelectron MicroscopyDNAHumansModels, MolecularPromoter Regions, GeneticProtein BindingSubstrate SpecificityTATA-Binding Protein Associated FactorsTATA BoxTATA-Box Binding ProteinTranscription Factor TFIIATranscription Factor TFIIDDNATATA-Binding Protein Associated FactorsTATA-Box Binding ProteinTranscription Factor TFIIATranscription Factor TFIID

Identifiers

PMID27007846
PMCPMC4856295
OpenAlexW2308896320

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.