Evidence map›Paper›PMID 27007659›Full record

ArticlePloS one2016

Whole Exome Sequencing in Patients with the Cuticular Drusen Subtype of Age-Related Macular Degeneration.

Maheswara R Duvvari, Johannes P H van de Ven, Maartje J Geerlings, Nicole T M Saksens, Bjorn Bakker, Arjen Henkes, Kornelia Neveling, Marisol del Rosario, Dineke Westra, Lambertus P W J van den Heuvel and 6 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
4.3field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 38 citations in OpenAlex.

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  12. Making Biological Sense of Genetic Studies of Age-Related Macular Degeneration.Advances in experimental medicine and biology · 2021
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  17. Association Between Monocyte Chemotactic Protein 1 Variants and Age-Related Macular Degeneration Onset Among Chinese People.Medical science monitor : international medical journal of experimental and clinical research · 2020
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 4 institutions in 2 countries.

Maheswara R DuvvariDepartment of Ophthalmology, Radboud University Medical Centre, Nijmegen, the Netherlands.
Johannes P H van de VenDepartment of Ophthalmology, Radboud University Medical Centre, Nijmegen, the Netherlands.
Maartje J GeerlingsDepartment of Ophthalmology, Radboud University Medical Centre, Nijmegen, the Netherlands.
Nicole T M SaksensDepartment of Ophthalmology, Radboud University Medical Centre, Nijmegen, the Netherlands.
Bjorn BakkerDepartment of Ophthalmology, Radboud University Medical Centre, Nijmegen, the Netherlands.
Arjen HenkesDepartment of Ophthalmology, Radboud University Medical Centre, Nijmegen, the Netherlands.
Kornelia NevelingDepartment of Human Genetics, Radboud University Medical Centre, Nijmegen, the Netherlands.
Marisol del RosarioDepartment of Human Genetics, Radboud University Medical Centre, Nijmegen, the Netherlands.
Dineke WestraDepartment of Pediatric Nephrology, Radboud University Medical Centre, Nijmegen, the Netherlands.
Lambertus P W J van den HeuvelDepartment of Pediatric Nephrology, Radboud University Medical Centre, Nijmegen, the Netherlands.
Tina SchickDepartment of Ophthalmology, University Hospital of Cologne, Cologne, Germany.
Sascha FauserDepartment of Ophthalmology, University Hospital of Cologne, Cologne, Germany.
Camiel J F BoonDepartment of Ophthalmology, Radboud University Medical Centre, Nijmegen, the Netherlands.
Carel B HoyngDepartment of Ophthalmology, Radboud University Medical Centre, Nijmegen, the Netherlands.
Eiko K de JongDepartment of Ophthalmology, Radboud University Medical Centre, Nijmegen, the Netherlands.
Anneke I den HollanderDepartment of Ophthalmology, Radboud University Medical Centre, Nijmegen, the Netherlands.
Radboud University Medical Center · NLRadboud University Nijmegen · NLUniversity Hospital Cologne · DELeiden University Medical Center · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Age-related macular degeneration (AMD) is the leading cause of irreversible blindness in elderly people worldwide. Cuticular drusen (CD) is a clinical subtype of AMD, which typically displays an earlier age at onset, and has a strong genetic component. Genetic studies support a role for rare sequence variants in CD susceptibility, and rare sequence variants in the CFH gene have been identified in 8.8% of CD cases. To further explore the role of rare variants in CD, we performed whole exome sequencing (WES) in 14 affected members of six families and 12 sporadic cases with CD. We detected rare sequence variants in CFH and FBLN5, which previously were shown to harbor rare variants in patients with CD. In addition, we detected heterozygous rare sequence variants in several genes encoding components of the extracellular matrix (ECM), including FBLN1, FBLN3/EFEMP1, FBLN5, FBLN6/HMCN1, FBN2, and COL15A1. Two rare pathogenic variants were identified in the COL15A1 gene: one in a sporadic case and another was found to segregate in a family with six affected individuals with CD. In addition, two rare pathogenic variants were identified in the FGL1 gene in three unrelated CD cases. These findings suggest that alterations in the ECM and in the coagulation pathway may play a role in the pathogenesis of CD. The identified candidate genes require further analyses in larger cohorts to confirm their role in the CD subtype of AMD. No evidence was found of rare sequence variants in a single gene that segregate with CD in the six families, suggesting that the disease is genetically heterogeneous.

Indexed as

Complement Factor HExomeExtracellular MatrixExtracellular Matrix ProteinsFemaleGenetic VariationHeterozygoteHumansMacular DegenerationMaleMiddle AgedMutation, MissenseRetinal DrusenComplement Factor HExtracellular Matrix ProteinsFBLN5 protein, human

Identifiers

PMID27007659
PMCPMC4805164
OpenAlexW2309264474

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.