Evidence map›Paper›PMID 27006477›Full record

ArticleMolecular & cellular proteomics : MCP2016

Comparison of the Proteome of Adult and Cord Erythroid Cells, and Changes in the Proteome Following Reticulocyte Maturation.

Marieangela C Wilson, Kongtana Trakarnsanga, Kate J Heesom, Nicola Cogan, Carole Green, Ashley M Toye, Steve F Parsons, David J Anstee, Jan Frayne

Abstract readComparative Study
In one paragraph

Article in Molecular & cellular proteomics : MCP, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 65 papers.

0numbers the graph read from it
0cells of the map it votes in
65citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

65 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
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  6. Article
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  11. Review
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  15. Red Blood Cell Omics and Machine Learning in Transfusion Medicine: Singularity Is Near.Transfusion medicine and hemotherapy : offizielles Organ der Deutschen Gesellschaft fur Transfusionsmedizin und Immunhamatologie · 2023
    Review
  16. Review
  17. Review
  18. Reticulocyte Maturation.Membranes · 2022
    Review
  19. Article
  20. Antimicrobial agents and chemotherapy · 2022
    Article

5 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Marieangela C WilsonFrom the ‡School of Biochemistry, University of Bristol, Bristol, UK;
Kongtana TrakarnsangaFrom the ‡School of Biochemistry, University of Bristol, Bristol, UK; §Department of Biochemistry, Faculty of Medicine Siriraj Hospital, Mahidol University, Bangkok, Thailand;
Kate J HeesomFrom the ‡School of Biochemistry, University of Bristol, Bristol, UK;
Nicola Cogan¶Bristol Institute for Transfusion Sciences, National Health Service Blood and Transplant (NHSBT), Filton, Bristol, UK; ‖NIHR Blood and Transplant Research Unit, University of Bristol, Bristol, UK.
Carole Green¶Bristol Institute for Transfusion Sciences, National Health Service Blood and Transplant (NHSBT), Filton, Bristol, UK; ‖NIHR Blood and Transplant Research Unit, University of Bristol, Bristol, UK.
Ashley M ToyeFrom the ‡School of Biochemistry, University of Bristol, Bristol, UK; ¶Bristol Institute for Transfusion Sciences, National Health Service Blood and Transplant (NHSBT), Filton, Bristol, UK; ‖NIHR Blood and Transplant Research Unit, University of Bristol, Bristol, UK.
Steve F Parsons¶Bristol Institute for Transfusion Sciences, National Health Service Blood and Transplant (NHSBT), Filton, Bristol, UK;
David J Anstee¶Bristol Institute for Transfusion Sciences, National Health Service Blood and Transplant (NHSBT), Filton, Bristol, UK; ‖NIHR Blood and Transplant Research Unit, University of Bristol, Bristol, UK.
Jan FrayneFrom the ‡School of Biochemistry, University of Bristol, Bristol, UK; ‖NIHR Blood and Transplant Research Unit, University of Bristol, Bristol, UK. jan.frayne@bristol.ac.uk.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cord blood stem cells are an attractive starting source for the production of red blood cells in vitro for therapy because of additional expansion potential compared with adult peripheral blood progenitors and cord blood banks usually being more representative of national populations than blood donors. Consequently, it is important to establish how similar cord RBCs are to adult cells. In this study, we used multiplex tandem mass tag labeling combined with nano-LC-MS/MS to compare the proteome of adult and cord RBCs and reticulocytes. 2838 unique proteins were identified, providing the most comprehensive compendium of RBC proteins to date. Using stringent criteria, 1674 proteins were quantified, and only a small number differed in amount between adult and cord RBC. We focused on proteins critical for RBC function. Of these, only the expected differences in globin subunits, along with higher levels of carbonic anhydrase 1 and 2 and aquaporin-1 in adult RBCs would be expected to have a phenotypic effect since they are associated with the differences in gaseous exchange between adults and neonates. Since the RBC and reticulocyte samples used were autologous, we catalogue the change in proteome following reticulocyte maturation. The majority of proteins (>60% of the 1671 quantified) reduced in abundance between 2- and 100-fold following maturation. However, ∼5% were at a higher level in RBCs, localized almost exclusively to cell membranes, in keeping with the known clearance of intracellular recycling pools during reticulocyte maturation. Overall, these data suggest that, with respect to the proteome, there is no barrier to the use of cord progenitors for the in vitro generation of RBCs for transfusion to adults other than the expression of fetal, not adult, hemoglobin.

Indexed as

AdultCarbonic Anhydrase ICarbonic Anhydrase IICell DifferentiationChromatography, LiquidErythroid CellsFetal BloodHumansInfant, NewbornProteomeProteomicsReticulocytesTandem Mass SpectrometryCarbonic Anhydrase ICarbonic Anhydrase IIProteome

Identifiers

PMID27006477
PMCPMC5083095

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.