Evidence map›Paper›PMID 27005600›Full record

ArticleMolecules (Basel, Switzerland)2016

Cloning, Expression Profiling and Functional Analysis of CnHMGS, a Gene Encoding 3-hydroxy-3-Methylglutaryl Coenzyme A Synthase from Chamaemelum nobile.

Shuiyuan Cheng, Xiaohui Wang, Feng Xu, Qiangwen Chen, Tingting Tao, Jing Lei, Weiwei Zhang, Yongling Liao, Jie Chang, Xingxiang Li

Open access · goldAbstract read
In one paragraph

Article in Molecules (Basel, Switzerland), 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.9field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Cloning and Characterization of the Gene EncodingBioMed research international · 2022
    Article
  3. Review
  4. Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Shuiyuan ChengSchool of Biology and Pharmaceutical Engineering, Wuhan Polytechnic University, Wuhan 430023, China. s_y_cheng@sina.com.
Xiaohui WangCollege of Horticulture and Gardening, Yangtze University, Jingzhou 434025, Hubei, China. wxhunique@foxmail.com.
Feng XuCollege of Horticulture and Gardening, Yangtze University, Jingzhou 434025, Hubei, China. xufeng198@126.com.
Qiangwen ChenCollege of Horticulture and Gardening, Yangtze University, Jingzhou 434025, Hubei, China. chenqwx@foxmail.com.
Tingting TaoCollege of Horticulture and Gardening, Yangtze University, Jingzhou 434025, Hubei, China. taotaoo2o3@foxmail.com.
Jing LeiCollege of Horticulture and Gardening, Yangtze University, Jingzhou 434025, Hubei, China. 13872337364@163.com.
Weiwei ZhangCollege of Horticulture and Gardening, Yangtze University, Jingzhou 434025, Hubei, China. zww8312@163.com.
Yongling LiaoCollege of Horticulture and Gardening, Yangtze University, Jingzhou 434025, Hubei, China. liaoyongling@yeah.net.
Jie ChangHubei Collaborative Innovation Center of Targeted Antitumor Drug, Jingchu University of Technology, Jingmen 448000, Hubei, China. 18986662379@163.com.
Xingxiang LiMedical School, Yangtze University, Jingzhou 434025, Hubei, China. lxx@yangtzeu.edu.cn.
Yangtze University · CNJingchu University of Technology · CNWuhan Polytechnic University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Roman chamomile (Chamaemelum nobile L.) is renowned for its production of essential oils, which major components are sesquiterpenoids. As the important enzyme in the sesquiterpenoid biosynthesis pathway, 3-hydroxy-3-methylglutaryl coenzyme A synthase (HMGS) catalyze the crucial step in the mevalonate pathway in plants. To isolate and identify the functional genes involved in the sesquiterpene biosynthesis of C. nobile L., a HMGS gene designated as CnHMGS (GenBank Accession No. KU529969) was cloned from C. nobile. The cDNA sequence of CnHMGS contained a 1377 bp open reading frame encoding a 458-amino-acid protein. The sequence of the CnHMGS protein was highly homologous to those of HMGS proteins from other plant species. Phylogenetic tree analysis revealed that CnHMGS clustered with the HMGS of Asteraceae in the dicotyledon clade. Further functional complementation of CnHMGS in the mutant yeast strain YSC6274 lacking HMGS activity demonstrated that the cloned CnHMGS cDNA encodes a functional HMGS. Transcript profile analysis indicated that CnHMGS was preferentially expressed in flowers and roots of C. nobile. The expression of CnHMGS could be upregulated by exogenous elicitors, including methyl jasmonate and salicylic acid, suggesting that CnHMGS was elicitor-responsive. The characterization and expression analysis of CnHMGS is helpful to understand the biosynthesis of sesquiterpenoid in C. nobile at the molecular level and also provides molecular wealth for the biotechnological improvement of this important medicinal plant.

Indexed as

PhylogenyAmino Acid SequenceAsteraceaeBase SequenceChamaemelumCloning, MolecularDNA, ComplementaryGene Expression Regulation, EnzymologicHydroxymethylglutaryl-CoA SynthaseMevalonic AcidSequence Homology, Amino AcidDNA, ComplementaryHydroxymethylglutaryl-CoA SynthaseMevalonic Acid3-hydroxy-3-methylglutaryl coenzyme A synthaseChamaemelum nobilecloningexpression profilefunctional complementation analysissesquiterpenoid biosynthesis

Identifiers

PMID27005600
PMCPMC6274341
OpenAlexW2292999542

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.