Evidence map›Paper›PMID 27002540›Full record

ArticleThe Journal of general virology2016

Application of the thermofluor PaSTRy technique for improving foot-and-mouth disease virus vaccine formulation.

Abhay Kotecha, Fuquan Zhang, Nicholas Juleff, Terry Jackson, Eva Perez, Dave Stuart, Elizabeth Fry, Bryan Charleston, Julian Seago

Open access · hybridAbstract read
In one paragraph

Article in The Journal of general virology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
6.0field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 31 citations in OpenAlex.

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  12. Integrative Approaches to Study Virus Structures.Sub-cellular biochemistry · 2024
    Review
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  20. Cryo-EM structure of pleconaril-resistant rhinovirus-B5 complexed to the antiviral OBR-5-340 reveals unexpected binding site.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Abhay KotechaDivision of Structural Biology, Wellcome Trust Centre for Human Genetics, University of Oxford, Roosevelt Drive, Oxford OX3 7BN, UK.
Fuquan ZhangThe Pirbright Institute, Woking, Surrey, GU24 0NF, UK.
Nicholas JuleffThe Pirbright Institute, Woking, Surrey, GU24 0NF, UK.
Terry JacksonThe Pirbright Institute, Woking, Surrey, GU24 0NF, UK.
Eva PerezThe Pirbright Institute, Woking, Surrey, GU24 0NF, UK.
Dave StuartDivision of Structural Biology, Wellcome Trust Centre for Human Genetics, University of Oxford, Roosevelt Drive, Oxford OX3 7BN, UK.
Elizabeth FryDivision of Structural Biology, Wellcome Trust Centre for Human Genetics, University of Oxford, Roosevelt Drive, Oxford OX3 7BN, UK.
Bryan CharlestonThe Pirbright Institute, Woking, Surrey, GU24 0NF, UK.
Julian SeagoThe Pirbright Institute, Woking, Surrey, GU24 0NF, UK.
The Pirbright Institute · GBUniversity of Oxford · GBCentre for Human Genetics · GB

Funding

Biotechnology and Biological Sciences Research CouncilMedical Research Council G100099Medical Research Council MR/N00065X/1Wellcome TrustWellcome Trust 089755Wellcome Trust 09053/Z/09/Z
6 · The paper itself

Abstract

Foot-and-mouth disease (FMD) has a major economic impact throughout the world and is a considerable threat to food security. Current FMD virus (FMDV) vaccines are made from chemically inactivated virus and need to contain intact viral capsids to maximize efficacy. FMDV exists as seven serotypes, each made up by a number of constantly evolving subtypes. A lack of immunological cross-reactivity between serotypes and between some strains within a serotype greatly complicates efforts to control FMD by vaccination. Thus, vaccines for one serotype do not afford protection against the others, and multiple-serotype-specific vaccines are required for effective control. The FMDV serotypes exhibit variation in their thermostability, and the capsids of inactivated preparations of the O, C and SAT serotypes are particularly susceptible to dissociation at elevated temperature. Methods to quantify capsid stability are currently limited, lack sensitivity and cannot accurately reflect differences in thermostability. Thus, new, more sensitive approaches to quantify capsid stability would be of great value for the production of more stable vaccines and to assess the effect of production conditions on vaccine preparations. Here we have investigated the application of a novel methodology (termed PaSTRy) that utilizes an RNA-binding fluorescent dye and a quantitative (q)PCR machine to monitor viral genome release and hence dissociation of the FMDV capsid during a slow incremental increase in temperature. PaSTRy was used to characterize capsid stability of all FMDV serotypes. Furthermore, we have used this approach to identify stabilizing factors for the most labile FMDV serotypes.

Indexed as

AnimalsCapsidCapsid ProteinsCell LineCricetinaeFoot-and-Mouth DiseaseFoot-and-Mouth Disease VirusGenome, ViralGoatsHot TemperaturePolymerase Chain ReactionSerogroupVaccinationVaccines, InactivatedViral VaccinesCapsid ProteinsVaccines, InactivatedViral Vaccines

Identifiers

PMID27002540
PMCPMC5042063
OpenAlexW2305914971

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.