Evidence map›Paper›PMID 27002143›Full record

ArticleThe Journal of biological chemistry2016

IQ Motif and SEC7 Domain-containing Protein 3 (IQSEC3) Interacts with Gephyrin to Promote Inhibitory Synapse Formation.

Ji Won Um, Gayoung Choii, Dongseok Park, Dongwook Kim, Sangmin Jeon, Hyeyeon Kang, Takuma Mori, Theofilos Papadopoulos, Taesun Yoo, Yeunkum Lee and 3 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 35 citations in OpenAlex.

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  6. Review
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  8. Thermodynamic modulation of gephyrin condensation by inhibitory synapse components.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  9. Flavonoids as Potential Natural Compounds for the Prevention and Treatment of Eczema.Anti-inflammatory & anti-allergy agents in medicinal chemistry · 2024
    Review
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  19. Structure-Function Relationships of Glycine and GABAFrontiers in molecular neuroscience · 2018
    Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 3 countries.

Ji Won UmFrom the Department of Biochemistry, College of Life Science and Biotechnology, Yonsei University, Seoul 120-749, Republic of Korea, the Department of Physiology and BK21 PLUS Project for Medical Science, Yonsei University College of Medicine, Seoul 120-752, Republic of Korea.
Gayoung ChoiiFrom the Department of Biochemistry, College of Life Science and Biotechnology, Yonsei University, Seoul 120-749, Republic of Korea.
Dongseok Parkthe Department of Physiology and BK21 PLUS Project for Medical Science, Yonsei University College of Medicine, Seoul 120-752, Republic of Korea.
Dongwook Kimthe Department of Physiology and BK21 PLUS Project for Medical Science, Yonsei University College of Medicine, Seoul 120-752, Republic of Korea.
Sangmin JeonFrom the Department of Biochemistry, College of Life Science and Biotechnology, Yonsei University, Seoul 120-749, Republic of Korea.
Hyeyeon Kangthe Department of Physiology and BK21 PLUS Project for Medical Science, Yonsei University College of Medicine, Seoul 120-752, Republic of Korea.
Takuma Morithe Shinshu University School of Medicine, Matsumoto 390-8621, Japan.
Theofilos Papadopoulosthe Department of Molecular Biology, University Medicine Göttingen, Göttingen 37075, Germany.
Taesun Yoothe Department of Biological Sciences, Korea Advanced Institute of Science and Technology, Daejeon 305-701, Republic of Korea.
Yeunkum Leethe Center for Synaptic Brain Dysfunctions, Institute for Basic Science, Daejeon 305-701, Republic of Korea, and.
Eunjoon Kimthe Department of Biological Sciences, Korea Advanced Institute of Science and Technology, Daejeon 305-701, Republic of Korea, the Center for Synaptic Brain Dysfunctions, Institute for Basic Science, Daejeon 305-701, Republic of Korea, and.
Katsuhiko Tabuchithe Shinshu University School of Medicine, Matsumoto 390-8621, Japan, PRESTO, Japan Science and Technology Agency, Kawaguchi 332-0012, Japan.
Jaewon KoFrom the Department of Biochemistry, College of Life Science and Biotechnology, Yonsei University, Seoul 120-749, Republic of Korea, jaewonko@yonsei.ac.kr.ORCID http://orcid.org/0000-0001-9184-1574
Yonsei University · KRKorea Advanced Institute of Science and Technology · KRShinshu University · JPInstitute for Basic Science · KRUniversitätsmedizin Göttingen · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Gephyrin is a central scaffold protein that mediates development, function, and plasticity of mammalian inhibitory synapses by interacting with various inhibitory synaptic proteins. Here, we show that IQSEC3, a guanine nucleotide exchange factor for ARF6, directly interacts with gephyrin, an interaction that is critical for the inhibitory synapse localization of IQSEC3. Overexpression of IQSEC3 increases inhibitory, but not excitatory, synapse density in a guanine nucleotide exchange factor activity-dependent manner. Conversely, knockdown of IQSEC3 decreases size of gephyrin cluster without altering gephyrin puncta density. Collectively, these data reveal that IQSEC3 acts together with gephyrin to regulate inhibitory synapse development.

Indexed as

Carrier ProteinsGuanine Nucleotide Exchange FactorsMembrane ProteinsSynapsesAnimalsHumansRatsCarrier ProteinsgephyrinGuanine Nucleotide Exchange FactorsMembrane ProteinsBRAG3gephyrininhibition mechanisminhibitory synapseIQSEC3protein-protein interactionscaffold proteinsynapseSynARFGEFγ-aminobutyric acid (GABA)

Identifiers

PMID27002143
PMCPMC4858964
OpenAlexW2306171432

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.