Evidence map›Paper›PMID 27001825›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2016

Combgap contributes to recruitment of Polycomb group proteins in Drosophila.

Payal Ray, Sandip De, Apratim Mitra, Karel Bezstarosti, Jeroen A A Demmers, Karl Pfeifer, Judith A Kassis

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
4.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 66 citations in OpenAlex.

  1. Review
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  5. Developmental patterning of adipose tissue bybioRxiv : the preprint server for biology · 2026
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  7. Breaking anterior-posterior symmetry in the moth flybioRxiv : the preprint server for biology · 2025
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  10. Science advances · 2024
    Article
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  15. Polycomb Recruiters Inside and Outside of the Repressed Domains.International journal of molecular sciences · 2023
    Review
  16. Article
  17. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Payal RayEunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, MD 20892;
Sandip DeEunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, MD 20892;
Apratim MitraEunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, MD 20892;
Karel BezstarostiProteomics Centre, Erasmus University Medical Center, 3015 GE Rotterdam, The Netherlands; Department of Cell Biology, Erasmus University Medical Center, 3015 GE Rotterdam, The Netherlands.
Jeroen A A DemmersProteomics Centre, Erasmus University Medical Center, 3015 GE Rotterdam, The Netherlands; Department of Cell Biology, Erasmus University Medical Center, 3015 GE Rotterdam, The Netherlands.
Karl PfeiferEunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, MD 20892;
Judith A KassisEunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, MD 20892; jkassis@mail.nih.gov.
Eunice Kennedy Shriver National Institute of Child Health and Human Development · USErasmus MC · NLNational Institutes of Health · US

Funding

Regulated expression and developmental functions of the H19 long noncoding RNAZIAHD001804 · NICHD · EUNICE KENNEDY SHRIVER NATIONAL INSTITUTE OF CHILD HEALTH & HUMAN DEVELOPMENT · PI PFEIFER, KARL ERIC · 2009 to 2025
$20.2M
Control Of Gene Expression During DevelopmentZIAHD005003 · NICHD · EUNICE KENNEDY SHRIVER NATIONAL INSTITUTE OF CHILD HEALTH & HUMAN DEVELOPMENT · PI KASSIS, JUDITH ANN · 2009 to 2023
$16.4M
6 · The paper itself

Abstract

Polycomb group (PcG) proteins are responsible for maintaining the silenced transcriptional state of many developmentally regulated genes. PcG proteins are organized into multiprotein complexes that are recruited to DNA via cis-acting elements known as "Polycomb response elements" (PREs). In Drosophila, PREs consist of binding sites for many different DNA-binding proteins, some known and others unknown. Identification of these DNA-binding proteins is crucial to understanding the mechanism of PcG recruitment to PREs. We report here the identification of Combgap (Cg), a sequence-specific DNA-binding protein that is involved in recruitment of PcG proteins. Cg can bind directly to PREs via GTGT motifs and colocalizes with the PcG proteins Pleiohomeotic (Pho) and Polyhomeotic (Ph) at the majority of PREs in the genome. In addition, Cg colocalizes with Ph at a number of targets independent of Pho. Loss of Cg leads to decreased recruitment of Ph at only a subset of sites; some of these sites are binding sites for other Polycomb repressive complex 1 (PRC1) components, others are not. Our data suggest that Cg can recruit Ph in the absence of PRC1 and illustrate the diversity and redundancy of PcG protein recruitment mechanisms.

Indexed as

AnimalsBinding SitesCell DifferentiationDNADNA-Binding ProteinsDrosophila melanogasterDrosophila ProteinsGene Expression Regulation, DevelopmentalNucleotide MotifsPolycomb-Group ProteinsPolycomb Repressive Complex 1Transcription Factorscg protein, DrosophilaDNADNA-Binding ProteinsDrosophila ProteinsPc protein, Drosophilaph-d protein, Drosophilapho protein, DrosophilaPolycomb-Group ProteinsPolycomb Repressive Complex 1Transcription FactorsCombgapgene expressionPcG recruitmentPolycombPREs

Identifiers

PMID27001825
PMCPMC4833261
OpenAlexW2311166668

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.