Evidence map›Paper›PMID 27001729›Full record

ArticleNature chemistry2016

Modular synthesis of N-glycans and arrays for the hetero-ligand binding analysis of HIV antibodies.

Sachin S Shivatare, Shih-Huang Chang, Tsung-I Tsai, Susan Yu Tseng, Vidya S Shivatare, Yih-Shyan Lin, Yang-Yu Cheng, Chien-Tai Ren, Chang-Chun David Lee, Sujeet Pawar and 8 more

Open access · greenAbstract read
In one paragraph

Article in Nature chemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 53 papers.

0numbers the graph read from it
0cells of the map it votes in
53citing papers in PubMed
9.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

53 citing papers in PubMed, 115 citations in OpenAlex.

  1. Review
  2. Chemoenzymatic Synthesis of AsymmetricJournal of the American Chemical Society · 2026
    Article
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  6. Expedient Assembly of MultiantennaryJournal of the American Chemical Society · 2025
    Article
  7. Expediting Glycospace Exploration: Therapeutic Glycans via Automated Synthesis.Angewandte Chemie (International ed. in English) · 2025
    Review
  8. A Robust α-l-Fucosidase fromACS chemical biology · 2024
    Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Review
  14. Article
  15. Large-Scale Synthesis of ManACS infectious diseases · 2022
    Article
  16. Homo- and Heterogeneous Glycoconjugates on the Basis ofMolecules (Basel, Switzerland) · 2022
    Review
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 5 institutions in 2 countries.

Sachin S ShivatareGenomics Research Center, Academia Sinica, 128 Academia Road, Section 2, Nankang, Taipei 115, Taiwan.
Shih-Huang ChangGenomics Research Center, Academia Sinica, 128 Academia Road, Section 2, Nankang, Taipei 115, Taiwan.
Tsung-I TsaiThe Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, California 92037, USA.ORCID http://orcid.org/0000-0002-8355-6017
Susan Yu TsengGenomics Research Center, Academia Sinica, 128 Academia Road, Section 2, Nankang, Taipei 115, Taiwan.ORCID http://orcid.org/0000-0002-5710-6960
Vidya S ShivatareGenomics Research Center, Academia Sinica, 128 Academia Road, Section 2, Nankang, Taipei 115, Taiwan.
Yih-Shyan LinCHO Pharma Inc., Park Street, Nangang District, Taipei 11503, Taiwan.
Yang-Yu ChengGenomics Research Center, Academia Sinica, 128 Academia Road, Section 2, Nankang, Taipei 115, Taiwan.
Chien-Tai RenGenomics Research Center, Academia Sinica, 128 Academia Road, Section 2, Nankang, Taipei 115, Taiwan.
Chang-Chun David LeeGenomics Research Center, Academia Sinica, 128 Academia Road, Section 2, Nankang, Taipei 115, Taiwan.
Sujeet PawarGenomics Research Center, Academia Sinica, 128 Academia Road, Section 2, Nankang, Taipei 115, Taiwan.
Charng-Sheng TsaiCHO Pharma Inc., Park Street, Nangang District, Taipei 11503, Taiwan.
Hao-Wei ShihCHO Pharma Inc., Park Street, Nangang District, Taipei 11503, Taiwan.
Yi-Fang ZengCHO Pharma Inc., Park Street, Nangang District, Taipei 11503, Taiwan.
Chi-Hui LiangGenomics Research Center, Academia Sinica, 128 Academia Road, Section 2, Nankang, Taipei 115, Taiwan.
Peter D KwongVaccine Research Center, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, Maryland 20892, USA.
Dennis R BurtonThe Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, California 92037, USA.
Chung-Yi WuGenomics Research Center, Academia Sinica, 128 Academia Road, Section 2, Nankang, Taipei 115, Taiwan.
Chi-Huey WongGenomics Research Center, Academia Sinica, 128 Academia Road, Section 2, Nankang, Taipei 115, Taiwan.
Genomics Research Center, Academia Sinica · TWEfficient Pharma Management (Taiwan) · TWScripps Research Institute · USNational Taiwan University · TWNational Institutes of Health · US

Funding

Viral Neutralization AssaysP01AI056375 · NIAID · MAXYGEN, INC. · PI WHALEN, ROBERT G. · 2005 to 2009
$11.1M
Carbohydrate-based Antiinfective AgentsR01AI072155 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI WONG, CHI-HUEY · 2007 to 2014
$3.7M
CAPRISA HIV-1 neutralizing antibodies: Harnessing ontogeny for immunogen designU01AI116086 · NIAID · WITS HEALTH CONSORTIUM (PTY), LTD · PI KWONG, PETER D, MASCOLA, JOHN R · 2015 to 2019
$874k
NIAID NIH HHS P01 AI056375NIAID NIH HHS R01 AI072155NIAID NIH HHS U01 AI116086
6 · The paper itself

Abstract

A new class of broadly neutralizing antibodies (bNAbs) from HIV donors has been reported to target the glycans on gp120--a glycoprotein found on the surface of the virus envelope--thus renewing hope of developing carbohydrate-based HIV vaccines. However, the version of gp120 used in previous studies was not from human T cells and so the glycosylation pattern could be somewhat different to that found in the native system. Moreover, some antibodies recognized two different glycans simultaneously and this cannot be detected with the commonly used glycan microarrays on glass slides. Here, we have developed a glycan microarray on an aluminium-oxide-coated glass slide containing a diverse set of glycans, including homo- and mixed N-glycans (high-mannose, hybrid and complex types) that were prepared by modular chemo-enzymatic methods to detect the presence of hetero-glycan binding behaviours. This new approach allows rapid screening and identification of optimal glycans recognized by neutralizing antibodies, and could speed up the development of HIV-1 vaccines targeting cell surface glycans.

Indexed as

AIDS VaccinesAntibodies, NeutralizingHIV-1HIV AntibodiesHIV Envelope Protein gp120HumansLigandsPolysaccharidesAIDS VaccinesAntibodies, NeutralizingHIV AntibodiesHIV Envelope Protein gp120LigandsPolysaccharides

Identifiers

PMID27001729
PMCPMC4806563
OpenAlexW2294568087

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.