Evidence map›Paper›PMID 27001508›Full record

ArticleNucleic acids research2016

'Modulation of the enzymatic activities of replicative helicase (DnaB) by interaction with Hp0897: a possible mechanism for helicase loading in Helicobacter pylori'.

Vijay Verma, Ajay Kumar, Ram Gopal Nitharwal, Jawed Alam, Asish Kumar Mukhopadhyay, Santanu Dasgupta, Suman Kumar Dhar

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.0field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Vijay VermaSpecial Centre for Molecular Medicine, Jawaharlal Nehru University, New Delhi-110067, India.
Ajay KumarSpecial Centre for Molecular Medicine, Jawaharlal Nehru University, New Delhi-110067, India.
Ram Gopal NitharwalSpecial Centre for Molecular Medicine, Jawaharlal Nehru University, New Delhi-110067, India Department of Cell and Molecular Biology, Uppsala University, Box 596, Uppsala-75124, Sweden.
Jawed AlamNational Institute of Cholera and Enteric Diseases, Kolkata-700010, India.
Asish Kumar MukhopadhyayNational Institute of Cholera and Enteric Diseases, Kolkata-700010, India.
Santanu DasguptaDepartment of Cell and Molecular Biology, Uppsala University, Box 596, Uppsala-75124, Sweden.
Suman Kumar DharSpecial Centre for Molecular Medicine, Jawaharlal Nehru University, New Delhi-110067, India skdhar2002@yahoo.co.in.
Jawaharlal Nehru University · INNational Institute of Cholera and Enteric Diseases · INUppsala University · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

DNA replication in Helicobacter pylori is initiated from a unique site (oriC) on its chromosome where several proteins assemble to form a functional replisome. The assembly of H. pylori replication machinery is similar to that of the model gram negative bacterium Escherichia coli except for the absence of DnaC needed to recruit the hexameric DnaB helicase at the replisome assembly site. In the absence of an obvious DnaC homologue inH. pylori, the question arises as to whether HpDnaB helicase is loaded at theHp-replication origin by itself or is assisted by other unidentified protein(s). A high-throughput yeast two-hybrid study has revealed two proteins of unknown functions (Hp0897 and Hp0340) that interact with HpDnaB. Here we demonstrate that Hp0897 interacts with HpDnaB helicase in vitro as well as in vivo Furthermore, the interaction stimulates the DNA binding activity of HpDnaB and modulates its adenosine triphosphate hydrolysis and helicase activities significantly. Prior complex formation of Hp0897 and HpDnaB enhances the binding/loading of DnaB onto DNA. Hp0897, along with HpDnaB, colocalizes with replication complex at initiation but does not move with the replisome during elongation. Together, these results suggest a possible role of Hp0897 in loading of HpDnaB at oriC.

Indexed as

Bacterial ProteinsDNA, BacterialDnaB HelicasesDNA-Directed DNA PolymeraseHelicobacter pyloriMultienzyme ComplexesProtein BindingProtein MultimerizationReplisomesBacterial ProteinsDNA, BacterialDnaB HelicasesDNA-Directed DNA PolymeraseMultienzyme ComplexesReplisomes

Identifiers

PMID27001508
PMCPMC4838378
OpenAlexW2309438907

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.