ArticleBMC plant biology2016
Quantitative trait loci analysis and genome-wide comparison for silique related traits in Brassica napus.
Article in BMC plant biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers, 1 of them a synthesis that pooled it.
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Who cites it
39 citing papers in PubMed, 1 synthesis or guideline pooled it.
- QTL analysis and candidate gene prediction for seed density per silique by QTL-seq and RNA-seq in spring Brassica napus L.PloS one · 2023Pooled it
- Transcriptomic and Metabolomic Investigation of Cell Wall Remodeling and Hormonal Signaling Dysfunction in Short Silique Mutant Rapeseed.International journal of molecular sciences · 2026Article
- An integrated fine-mapping, re-sequencing and transcriptome analysis provides further insights and candidate genes for silique number in oilseed rape (Brassica napus L.).BMC plant biology · 2026Article
- Candidate genomic regions underlying capsule shattering in sesame revealed by multi-model GWAS and field-based phenotyping.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026Article
- Genetic analysis of silique and seed traits in Brassica juncea (L.) Czern. under differential doses of nitrogen application.Scientific reports · 2025Article
- Cytological and genetic analyses of the seed number per silique locus BnSNSC09 in Brassica napus.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025Article
- Genome-wide association study reveals genetic loci for seed density per silique in rapeseed (Brassica napus L.).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025Article
- Fine mapping and candidate gene analysis of the major QTL qSW-A03 for seed weight in Brassica napus.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025Article
- Genetic dissection of flowering time and fine mapping of qFT.A02-1 in rapeseed (Brassica napus L.).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025Article
- Integrating GWAS, RNA-Seq and functional analysis revealed that BnaA02.SE mediates silique elongation by affecting cell proliferation and expansion in Brassica napus.Plant biotechnology journal · 2024Article
- Molecular mapping and candidate gene identification of two major quantitative trait loci associated with silique length in oilseed rape (Molecular breeding : new strategies in plant improvement · 2024Article
- A 4.43-Kb deletion of chromosomal segment containing an ovate family protein confers long capsule in sesame (Sesamum indicum L.).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023Article
- Genetic analysis and QTL mapping for silique density in rapeseed (Brassica napus L.).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023Article
- Fine Mapping of a Pleiotropic Locus (International journal of molecular sciences · 2023Article
- Linkage and association mapping of ovule number per ovary (ON) in oilseed rape (Molecular breeding : new strategies in plant improvement · 2023Article
- QTL mapping for seed density per silique in Brassica napus.Scientific reports · 2023Article
- Phenotyping of Silique Morphology in Oilseed Rape Using Skeletonization with Hierarchical Segmentation.Plant phenomics (Washington, D.C.) · 2023Article
- Genome-Wide Association Studies of Salt Tolerance at the Seed Germination Stage and Yield-Related Traits inInternational journal of molecular sciences · 2022Article
- Genome-wide characterization of ovate family protein gene family associated with number of seeds per silique inFrontiers in plant science · 2022Article
- Genome-Wide Association Analysis Combined With Quantitative Trait Loci Mapping and Dynamic Transcriptome Unveil the Genetic Control of Seed Oil Content inFrontiers in plant science · 2022Article
Corrections and comments
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Authors and funding
12 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
backgroundYield of rapeseed is determined by three components: silique number, seed number per silique and thousand seed weight. Seed number per silique and thousand seed weight are influenced by silique length, seed density, silique breadth, silique thickness and silique volume. Some QTLs for silique traits have been reported in B. napus, however, no studies have focused on the six agronomic traits (seed number per silique, silique length, silique breadth, silique thickness, seed density and silique volume) simultaneously, and the genetic determinism of such complex traits have not been fully elucidated.
resultsIn this study, the six silique traits were evaluated using 348 lines of a doubled haploid population, the KN population. The results showed that 2, 4, 1, 1 and 2 QTLs explaining > 10 % of phenotypic variation were obtained for silique length, silique breadth, silique thickness, seed number per silique and silique volume, respectively. Notably, three major effect QTLs (cqSB-C6-1, cqSB-C6-2 and cqSV-C6-3) were identified in at least three environments, and 17 unique QTLs controlling at least two traits were obtained. A high-density consensus map containing 1225 markers was constructed for QTL comparison by combining the KN map with other five published maps. The comparative results revealed that 14, 13 and 11 QTLs for silique breadth, silique thickness and silique volume might be the potential new QTLs because few QTLs for these traits were reported in B. napus. In addition, potential new QTLs for silique length (11), seed number per silique (6) and seed density (5) were also identified. Twenty-five candidate genes underlying 27 QTLs for silique related traits were obtained.
conclusionsThis study constructed QTL analysis in B. napus, and obtained 60 consensus QTLs for six silique related traits. The potential new QTLs will enhance our understanding of the genetic control of silique traits, and the stable QTLs provided the targets for improving seed yield in future. These findings provided comprehensive insights into the genetic network affecting silique traits at QTL level in B. napus.
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