Evidence map›Paper›PMID 26996963›Full record

ArticleStructure (London, England : 1993)2016

New Structural Insights into the Genome and Minor Capsid Proteins of BK Polyomavirus using Cryo-Electron Microscopy.

Daniel L Hurdiss, Ethan L Morgan, Rebecca F Thompson, Emma L Prescott, Margarita M Panou, Andrew Macdonald, Neil A Ranson

Open access · hybridAbstract read
In one paragraph

Article in Structure (London, England : 1993), 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
3.8field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 65 citations in OpenAlex.

  1. Trial
  2. Review
  3. Ribosomal protein S25 promotes cell cycle entry for a productive BK polyomavirus infection.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2025
    Article
  4. Review
  5. Article
  6. Article
  7. Review
  8. The Conserved YPXViruses · 2024
    Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Review
  14. Article
  15. The Polyomavirus Episteme: A Database for Researchers.Microbiology resource announcements · 2021
    Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Daniel L HurdissAstbury Centre for Structural Molecular Biology, University of Leeds, Leeds LS2 9JT, UK.
Ethan L MorganAstbury Centre for Structural Molecular Biology, University of Leeds, Leeds LS2 9JT, UK.
Rebecca F ThompsonAstbury Centre for Structural Molecular Biology, University of Leeds, Leeds LS2 9JT, UK.
Emma L PrescottAstbury Centre for Structural Molecular Biology, University of Leeds, Leeds LS2 9JT, UK.
Margarita M PanouAstbury Centre for Structural Molecular Biology, University of Leeds, Leeds LS2 9JT, UK.
Andrew MacdonaldAstbury Centre for Structural Molecular Biology, University of Leeds, Leeds LS2 9JT, UK. Electronic address: a.macdonald@leeds.ac.uk.
Neil A RansonAstbury Centre for Structural Molecular Biology, University of Leeds, Leeds LS2 9JT, UK. Electronic address: n.a.ranson@leeds.ac.uk.
University of Leeds · GB

Funding

Medical Research Council MR/K012665/1Wellcome Trust 090932Wellcome Trust 090932/Z/09/ZWellcome Trust 094232/Z/10/ZWellcome Trust 096685/Z/11/ZWellcome Trust 102572/B/13/ZWellcome Trust 1052221/Z/14/Z
6 · The paper itself

Abstract

BK polyomavirus is the causative agent of several diseases in transplant patients and the immunosuppressed. In order to better understand the structure and life cycle of BK, we produced infectious virions and VP1-only virus-like particles in cell culture, and determined their three-dimensional structures using cryo-electron microscopy (EM) and single-particle image processing. The resulting 7.6-Å resolution structure of BK and 9.1-Å resolution of the virus-like particles are the highest-resolution cryo-EM structures of any polyomavirus. These structures confirm that the architecture of the major structural protein components of these human polyomaviruses are similar to previous structures from other hosts, but give new insight into the location and role of the enigmatic minor structural proteins, VP2 and VP3. We also observe two shells of electron density, which we attribute to a structurally ordered part of the viral genome, and discrete contacts between this density and both VP1 and the minor capsid proteins.

Indexed as

Genome, ViralAnimalsBK VirusCapsid ProteinsChlorocebus aethiopsCryoelectron MicroscopyHEK293 CellsHumansModels, MolecularVero CellsVirionVirus AssemblyCapsid Proteins

Identifiers

PMID26996963
PMCPMC4826271
OpenAlexW2267572255

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.