Evidence map›Paper›PMID 26996949›Full record

ArticleAmerican journal of human genetics2016

GTF2E2 Mutations Destabilize the General Transcription Factor Complex TFIIE in Individuals with DNA Repair-Proficient Trichothiodystrophy.

Christiane Kuschal, Elena Botta, Donata Orioli, John J Digiovanna, Sara Seneca, Kathelijn Keymolen, Deborah Tamura, Elizabeth Heller, Sikandar G Khan, Giuseppina Caligiuri and 11 more

Open access · bronzeAbstract read
In one paragraph

Article in American journal of human genetics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 75 citations in OpenAlex.

  1. Review
  2. Article
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  6. Review
  7. Review
  8. Loss-of-Function Variants inInternational journal of molecular sciences · 2024
    Review
  9. Article
  10. Characterization of TFIIE-regulated genes by transcriptome analysis.Turkish journal of biology = Turk biyoloji dergisi · 2024
    Article
  11. DNA Damage Responses, the Trump Card of Stem Cells in the Survival Game.Advances in experimental medicine and biology · 2024
    Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. DNA damage and repair: underlying mechanisms leading to microcephaly.Frontiers in cell and developmental biology · 2023
    Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 6 institutions in 4 countries.

Christiane KuschalDermatology Branch, National Cancer Institute, NIH, Bethesda, MD 20892, USA.
Elena BottaIstituto di Genetica Molecolare, Consiglio Nazionale delle Ricerche, Via Abbiategrasso 207, 27100 Pavia, Italy.
Donata OrioliIstituto di Genetica Molecolare, Consiglio Nazionale delle Ricerche, Via Abbiategrasso 207, 27100 Pavia, Italy.
John J DigiovannaDermatology Branch, National Cancer Institute, NIH, Bethesda, MD 20892, USA.
Sara SenecaCenter for Medical Genetics, Research Group Reproduction and Genetics, UZ Brussel, Vrije Universiteit Brussel, Laarbeeklaan 101, 1090 Brussels, Belgium.
Kathelijn KeymolenCenter for Medical Genetics, Research Group Reproduction and Genetics, UZ Brussel, Vrije Universiteit Brussel, Laarbeeklaan 101, 1090 Brussels, Belgium.
Deborah TamuraDermatology Branch, National Cancer Institute, NIH, Bethesda, MD 20892, USA.
Elizabeth HellerDermatology Branch, National Cancer Institute, NIH, Bethesda, MD 20892, USA.
Sikandar G KhanDermatology Branch, National Cancer Institute, NIH, Bethesda, MD 20892, USA.
Giuseppina CaligiuriIstituto di Genetica Molecolare, Consiglio Nazionale delle Ricerche, Via Abbiategrasso 207, 27100 Pavia, Italy.
Manuela LanzafameIstituto di Genetica Molecolare, Consiglio Nazionale delle Ricerche, Via Abbiategrasso 207, 27100 Pavia, Italy.
Tiziana NardoIstituto di Genetica Molecolare, Consiglio Nazionale delle Ricerche, Via Abbiategrasso 207, 27100 Pavia, Italy.
Roberta RicottiIstituto di Genetica Molecolare, Consiglio Nazionale delle Ricerche, Via Abbiategrasso 207, 27100 Pavia, Italy.
Fiorenzo A PeveraliIstituto di Genetica Molecolare, Consiglio Nazionale delle Ricerche, Via Abbiategrasso 207, 27100 Pavia, Italy.
Robert StephensCancer Research Technology Program, Frederick National Laboratory for Cancer Research, Leidos Biomedical Research, Inc., Frederick, MD 21702, USA; Advanced Biomedical Computing Center, Frederick National Laboratory for Cancer Research, Leidos Biomedical Research, Inc., Frederick, MD 21702, USA.
Yongmei ZhaoAdvanced Biomedical Computing Center, Frederick National Laboratory for Cancer Research, Leidos Biomedical Research, Inc., Frederick, MD 21702, USA.
Alan R LehmannGenome Damage and Stability Centre, School of Life Sciences, University of Sussex, Falmer, Brighton BN1 9RQ, UK.
Laura BaranelloLaboratory of Pathology, National Cancer Institute, NIH, Bethesda, MD 20892, USA.
David LevensLaboratory of Pathology, National Cancer Institute, NIH, Bethesda, MD 20892, USA.
Kenneth H KraemerDermatology Branch, National Cancer Institute, NIH, Bethesda, MD 20892, USA. Electronic address: kraemerk@nih.gov.
Miria StefaniniIstituto di Genetica Molecolare, Consiglio Nazionale delle Ricerche, Via Abbiategrasso 207, 27100 Pavia, Italy. Electronic address: stefanini@igm.cnr.it.
Istituto di Genetica Molecolare · ITNational Cancer Institute · USVrije Universiteit Brussel · BEFrederick National Laboratory for Cancer Research · USLeidos (United States) · USUniversity of Sussex · GB

Funding

DNA Repair in Human Cancer-Prone Genetic DiseasesZIABC004517 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI KRAEMER, KENNETH H · 2009 to 2024
$26.5M
Intramural NIH HHSTelethon GEP13022
6 · The paper itself

Abstract

The general transcription factor IIE (TFIIE) is essential for transcription initiation by RNA polymerase II (RNA pol II) via direct interaction with the basal transcription/DNA repair factor IIH (TFIIH). TFIIH harbors mutations in two rare genetic disorders, the cancer-prone xeroderma pigmentosum (XP) and the cancer-free, multisystem developmental disorder trichothiodystrophy (TTD). The phenotypic complexity resulting from mutations affecting TFIIH has been attributed to the nucleotide excision repair (NER) defect as well as to impaired transcription. Here, we report two unrelated children showing clinical features typical of TTD who harbor different homozygous missense mutations in GTF2E2 (c.448G>C [p.Ala150Pro] and c.559G>T [p.Asp187Tyr]) encoding the beta subunit of transcription factor IIE (TFIIEβ). Repair of ultraviolet-induced DNA damage was normal in the GTF2E2 mutated cells, indicating that TFIIE was not involved in NER. We found decreased protein levels of the two TFIIE subunits (TFIIEα and TFIIEβ) as well as decreased phosphorylation of TFIIEα in cells from both children. Interestingly, decreased phosphorylation of TFIIEα was also seen in TTD cells with mutations in ERCC2, which encodes the XPD subunit of TFIIH, but not in XP cells with ERCC2 mutations. Our findings support the theory that TTD is caused by transcriptional impairments that are distinct from the NER disorder XP.

Indexed as

DNA RepairAmino Acid SequenceCyclin-Dependent Kinase-Activating KinaseCyclin-Dependent KinasesDNA-Binding ProteinsDNA DamageDNA HelicasesFemaleGene SilencingHumansInfantMaleMolecular Sequence DataMutation, MissensePedigreePhosphorylationCyclin-Dependent Kinase-Activating KinaseCyclin-Dependent KinasesDNA-Binding ProteinsDNA HelicasesERCC2 protein, humanRNA, Small InterferingTranscription Factors, TFIItranscription factor TFIIETranscription Factor TFIIHXeroderma Pigmentosum Group D ProteinXPBC-ERCC-3 protein

Identifiers

PMID26996949
PMCPMC4833217
OpenAlexW2301830708

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.