Evidence map›Paper›PMID 26996663›Full record

ArticleOncogene2016

Collagen-rich stroma in aggressive colon tumors induces mesenchymal gene expression and tumor cell invasion.

T T Vellinga, S den Uil, I H B Rinkes, D Marvin, B Ponsioen, A Alvarez-Varela, S Fatrai, C Scheele, D A Zwijnenburg, H Snippert and 7 more

Open access · greenAbstract read
PubMed Publisher
In one paragraph

Article in Oncogene, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 70 papers.

0numbers the graph read from it
0cells of the map it votes in
70citing papers in PubMed
5.2field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

70 citing papers in PubMed, 112 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Advancements in 3D In Vitro Models for Colorectal Cancer.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2024
    Review
  10. Article
  11. M1 macrophages induce PD-L1Journal for immunotherapy of cancer · 2023
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Review
  19. Article
  20. Article

10 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 4 institutions in 1 country.

T T VellingaCancer Center, University Medical Center Utrecht, Utrecht, The Netherlands.
S den UilDepartment of Pathology, VU University Medical Center, Amsterdam, The Netherlands.
I H B RinkesCancer Center, University Medical Center Utrecht, Utrecht, The Netherlands.
D MarvinCancer Center, University Medical Center Utrecht, Utrecht, The Netherlands.
B PonsioenDepartment Molecular Cancer Research, University Medical Center Utrecht, Utrecht, The Netherlands.
A Alvarez-VarelaDepartment Molecular Cancer Research, University Medical Center Utrecht, Utrecht, The Netherlands.
S FatraiCancer Center, University Medical Center Utrecht, Utrecht, The Netherlands.
C ScheeleDepartment Molecular Cancer Research, University Medical Center Utrecht, Utrecht, The Netherlands.
D A ZwijnenburgDepartment of Oncogenomics, Academic Medical Center Amsterdam, Amsterdam, The Netherlands.
H SnippertDepartment Molecular Cancer Research, University Medical Center Utrecht, Utrecht, The Netherlands.
L VermeulenCenter of Experimental and Molecular Medicine, Academic Medical Center Amsterdam, Amsterdam, The Netherlands.
J P MedemaCenter of Experimental and Molecular Medicine, Academic Medical Center Amsterdam, Amsterdam, The Netherlands.
H B StockmannDepartment of Surgery, Spaarne Gasthuis, Haarlem, The Netherlands.
J KosterCenter of Experimental and Molecular Medicine, Academic Medical Center Amsterdam, Amsterdam, The Netherlands.
R J A FijnemanDepartment of Pathology, VU University Medical Center, Amsterdam, The Netherlands.
J de RooijDepartment of Surgery, Spaarne Gasthuis, Haarlem, The Netherlands.
O KranenburgCancer Center, University Medical Center Utrecht, Utrecht, The Netherlands.
University Medical Center Utrecht · NLAcademic Medical Center · NLSpaarne Gasthuis · NLThe Netherlands Cancer Institute · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Gene expression-based classification systems have identified an aggressive colon cancer subtype with mesenchymal features, possibly reflecting epithelial-to-mesenchymal transition (EMT) of tumor cells. However, stromal fibroblasts contribute extensively to the mesenchymal phenotype of aggressive colon tumors, challenging the notion of tumor EMT. To separately study the neoplastic and stromal compartments of colon tumors, we have generated a stroma gene filter (SGF). Comparative analysis of stroma

Indexed as

Cell DifferentiationCell Line, TumorCell MovementCell ProliferationCollagenColonic NeoplasmsEpithelial-Mesenchymal TransitionGene Expression Regulation, NeoplasticHepatocyte Nuclear Factor 4HumansStromal CellsTumor MicroenvironmentCollagenHepatocyte Nuclear Factor 4HNF4A protein, human

Identifiers

PMID26996663
OpenAlexW2301244061

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.