Evidence map›Paper›PMID 26996606›Full record

ArticleScientific reports2016

Lighting Up Clostridium Difficile: Reporting Gene Expression Using Fluorescent Lov Domains.

Anthony M Buckley, Caitlin Jukes, Denise Candlish, June J Irvine, Janice Spencer, Robert P Fagan, Andrew J Roe, John M Christie, Neil F Fairweather, Gillian R Douce

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
5.4field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 68 citations in OpenAlex.

  1. Defining the order of assembly of theJournal of bacteriology · 2026
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  2. Defining the order of assembly of thebioRxiv : the preprint server for biology · 2026
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  3. Analysis of essential genes inJournal of bacteriology · 2025
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  5. Analysis of Essential Genes inbioRxiv : the preprint server for biology · 2025
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  6. Article
  7. Microbial single-cell applications under anoxic conditions.Applied and environmental microbiology · 2024
    Review
  8. Rational Design of a Circularly Permuted Flavin-Based Fluorescent Protein.Chembiochem : a European journal of chemical biology · 2024
    Article
  9. Review
  10. Development and utilization of new OMicrobiology spectrum · 2024
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. A fluorescent reporter system for anaerobic thermophiles.Frontiers in bioengineering and biotechnology · 2023
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Anthony M BuckleyInstitute of Infection, Immunity and Inflammation, College of Medical, Veterinary &Life Sciences, University of Glasgow, Glasgow G12 8TA U.K.
Caitlin JukesInstitute of Infection, Immunity and Inflammation, College of Medical, Veterinary &Life Sciences, University of Glasgow, Glasgow G12 8TA U.K.
Denise CandlishInstitute of Infection, Immunity and Inflammation, College of Medical, Veterinary &Life Sciences, University of Glasgow, Glasgow G12 8TA U.K.
June J IrvineInstitute of Infection, Immunity and Inflammation, College of Medical, Veterinary &Life Sciences, University of Glasgow, Glasgow G12 8TA U.K.
Janice SpencerInstitute of Infection, Immunity and Inflammation, College of Medical, Veterinary &Life Sciences, University of Glasgow, Glasgow G12 8TA U.K.
Robert P FaganDepartment of Molecular Biology and Biotechnology, University of Sheffield, Western Bank, Sheffield S10 2TN U.K.
Andrew J RoeInstitute of Infection, Immunity and Inflammation, College of Medical, Veterinary &Life Sciences, University of Glasgow, Glasgow G12 8TA U.K.
John M ChristieInstitute of Molecular Cell and Systems Biology, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow G12 8TA U.K.
Neil F FairweatherDivision of Cell and Molecular Biology, Centre for Molecular Microbiology and Infection, Imperial College London, London SW7 2AZ U.K.
Gillian R DouceInstitute of Infection, Immunity and Inflammation, College of Medical, Veterinary &Life Sciences, University of Glasgow, Glasgow G12 8TA U.K.
University of Glasgow · GBImperial College London · GBUniversity of Sheffield · GB

Funding

Biotechnology and Biological Sciences Research Council BB/H023518/1Wellcome TrustWellcome Trust 086418Wellcome Trust 090969
6 · The paper itself

Abstract

The uses of fluorescent reporters derived from green fluorescent protein have proved invaluable for the visualisation of biological processes in bacteria grown under aerobic conditions. However, their requirement for oxygen has limited their application in obligate anaerobes such as Clostridium difficile. Fluorescent proteins derived from Light, Oxygen or Voltage sensing (LOV) domains have been shown to bridge this limitation, but their utility as translational fusions to monitor protein expression and localisation in a strict anaerobic bacterium has not been reported. Here we demonstrate the utility of phiLOV in three species of Clostridium and its application as a marker of real-time protein translation and dynamics through genetic fusion with the cell division protein, FtsZ. Time lapse microscopy of dividing cells suggests that Z ring assembly arises through the extension of the FtsZ arc starting from one point on the circumference. Furthermore, through incorporation of phiLOV into the flagella subunit, FliC, we show the potential of bacterial LOV-based fusion proteins to be successfully exported to the extracellular environment.

Indexed as

Protein BiosynthesisBacterial ProteinsBiosensing TechniquesClostridioides difficileCytoskeletal ProteinsFluorescent DyesGreen Fluorescent ProteinsMolecular ImagingOptical ImagingProtein TransportBacterial ProteinsCytoskeletal ProteinsFluorescent DyesFtsZ protein, BacteriaGreen Fluorescent Proteins

Identifiers

PMID26996606
PMCPMC4800718
OpenAlexW2304664643

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.