Evidence map›Paper›PMID 26996145›Full record

ArticleScientific reports2016

A two-component system regulates gene expression of the type IX secretion component proteins via an ECF sigma factor.

Tomoko Kadowaki, Hideharu Yukitake, Mariko Naito, Keiko Sato, Yuichiro Kikuchi, Yoshio Kondo, Mikio Shoji, Koji Nakayama

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 53 papers.

0numbers the graph read from it
0cells of the map it votes in
53citing papers in PubMed
9.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

53 citing papers in PubMed, 83 citations in OpenAlex.

  1. Article
  2. Article
  3. The survival status ofJournal of oral microbiology · 2026
    Review
  4. Article
  5. Article
  6. TheJournal of oral microbiology · 2025
    Article
  7. Advances in the type IX secretion system: an exploration focusing onCurrent research in microbial sciences · 2025
    Review
  8. Article
  9. Structure-function analysis of PorXScientific reports · 2024
    Article
  10. Review
  11. Article
  12. Review
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Intermolecular latency regulates the essential C-terminal signal peptidase and sortase of theProceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  19. Article
  20. A PorX/PorY and σmSphere · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Tomoko KadowakiDivision of Microbiology and Oral Infection, Department of Molecular Microbiology and Immunology, Graduate School of Biomedical Sciences, Nagasaki University, Nagasaki 852-8588, Japan.
Hideharu YukitakeDivision of Microbiology and Oral Infection, Department of Molecular Microbiology and Immunology, Graduate School of Biomedical Sciences, Nagasaki University, Nagasaki 852-8588, Japan.
Mariko NaitoDivision of Microbiology and Oral Infection, Department of Molecular Microbiology and Immunology, Graduate School of Biomedical Sciences, Nagasaki University, Nagasaki 852-8588, Japan.
Keiko SatoDivision of Microbiology and Oral Infection, Department of Molecular Microbiology and Immunology, Graduate School of Biomedical Sciences, Nagasaki University, Nagasaki 852-8588, Japan.
Yuichiro KikuchiDepartment of Microbiology, Tokyo Dental College, Tokyo 101-0061, Japan.
Yoshio KondoDivision of Microbiology and Oral Infection, Department of Molecular Microbiology and Immunology, Graduate School of Biomedical Sciences, Nagasaki University, Nagasaki 852-8588, Japan.
Mikio ShojiDivision of Microbiology and Oral Infection, Department of Molecular Microbiology and Immunology, Graduate School of Biomedical Sciences, Nagasaki University, Nagasaki 852-8588, Japan.
Koji NakayamaDivision of Microbiology and Oral Infection, Department of Molecular Microbiology and Immunology, Graduate School of Biomedical Sciences, Nagasaki University, Nagasaki 852-8588, Japan.
Nagasaki University · JPTokyo Dental College · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The periodontopathogen Porphyromonas gingivalis secretes potent pathogenic proteases, gingipains, via the type IX secretion system (T9SS). This system comprises at least 11 components; however, the regulatory mechanism of their expression has not yet been elucidated. Here, we found that the PorY (PGN_2001)-PorX (PGN_1019)-SigP (PGN_0274) cascade is involved in the regulation of T9SS. Surface plasmon resonance (SPR) analysis revealed a direct interaction between a recombinant PorY (rPorY) and a recombinant PorX (rPorX). rPorY autophosphorylated and transferred a phosphoryl group to rPorX in the presence of Mn(2+). These results demonstrate that PorX and PorY act as a response regulator and a histidine kinase, respectively, of a two component system (TCS), although they are separately encoded on the chromosome. T9SS component-encoding genes were down-regulated in a mutant deficient in a putative extracytoplasmic function (ECF) sigma factor, PGN_0274 (SigP), similar to the porX mutant. Electrophoretic gel shift assays showed that rSigP bound to the putative promoter regions of T9SS component-encoding genes. The SigP protein was lacking in the porX mutant. Co-immunoprecipitation and SPR analysis revealed the direct interaction between SigP and PorX. Together, these results indicate that the PorXY TCS regulates T9SS-mediated protein secretion via the SigP ECF sigma factor.

Indexed as

Bacterial ProteinsBacterial Secretion SystemsGene Expression Regulation, BacterialPhosphorylationPorphyromonas gingivalisPromoter Regions, GeneticProtein BindingProtein Processing, Post-TranslationalProtein TransportSigma FactorTranscription, GeneticBacterial ProteinsBacterial Secretion SystemsSigma Factor

Identifiers

PMID26996145
PMCPMC4800418
OpenAlexW2317445083

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.