Evidence map›Paper›PMID 26994476›Full record

ArticleJournal of experimental botany2016

A single cytosine deletion in the OsPLS1 gene encoding vacuolar-type H+-ATPase subunit A1 leads to premature leaf senescence and seed dormancy in rice.

Xi Yang, Pan Gong, Kunyu Li, Fudeng Huang, Fangmin Cheng, Gang Pan

Open access · bronzeAbstract read
In one paragraph

Article in Journal of experimental botany, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
11.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 48 citations in OpenAlex.

  1. Article
  2. Regulation of V-ATPase by Jasmonic Acid: Possible Role of Persulfidation.International journal of molecular sciences · 2023
    Article
  3. Article
  4. Mutation ofInternational journal of molecular sciences · 2022
    Article
  5. Review
  6. Article
  7. Review
  8. Frontiers in plant science · 2022
    Article
  9. Article
  10. Article
  11. International journal of molecular sciences · 2020
    Article
  12. Genome-Wide Identification of the Vacuolar HPlants (Basel, Switzerland) · 2020
    Article
  13. Article
  14. Article
  15. Article
  16. Transcriptional Profile Corroborates thatInternational journal of molecular sciences · 2019
    Article
  17. Physiological and Transcriptome Analyses of Early Leaf Senescence forInternational journal of molecular sciences · 2019
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Xi YangDepartment of Agronomy, Zijingang Campus, Zhejiang University, Hangzhou 310058, PR China.
Pan GongDepartment of Agronomy, Zijingang Campus, Zhejiang University, Hangzhou 310058, PR China.
Kunyu LiDepartment of Agronomy, Zijingang Campus, Zhejiang University, Hangzhou 310058, PR China.
Fudeng HuangInstitute of Crop and Nuclear Technology Utilization, Zhejiang Academy of Agricultural Sciences, Hangzhou 310021, PR China.
Fangmin ChengDepartment of Agronomy, Zijingang Campus, Zhejiang University, Hangzhou 310058, PR China.
Gang PanDepartment of Agronomy, Zijingang Campus, Zhejiang University, Hangzhou 310058, PR China pangang12@126.com.
Zhejiang University · CNZheJiang Academy of Agricultural Sciences · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Leaf senescence is a programmed developmental process orchestrated by many factors, but its molecular regulation is not yet fully understood. In this study, a novel Oryza sativa premature leaf senescence mutant (ospls1) was examined. Despite normal development in early seedlings, the ospls1 mutant leaves displayed lesion-mimics and early senescence, and a high transpiration rate after tillering. The mutant also showed seed dormancy attributable to physical (defect of micropyle structure) and physiological (abscisic acid sensitivity) factors. Using a map-based cloning approach, we determined that a cytosine deletion in the OsPLS1 gene encoding vacuolar H(+)-ATPase subunit A1 (VHA-A1) underlies the phenotypic abnormalities in the ospls1 mutant. The OsPSL1/VHA-A1 transcript levels progressively declined with the age-dependent leaf senescence in both the ospls1 mutant and its wild type. The significant decrease in both OsPSL1/VHA-A1 gene expression and VHA enzyme activity in the ospls1 mutant strongly suggests a negative regulatory role for the normal OsPLS1/VHA-A1 gene in the onset of rice leaf senescence. The ospls1 mutant featured higher salicylic acid (SA) levels and reactive oxygen species (ROS) accumulation, and activation of signal transduction by up-regulation of WRKY genes in leaves. Consistent with this, the ospls1 mutant exhibited hypersensitivity to exogenous SA and/or H2O2 Collectively, these results indicated that the OsPSL1/VAH-A1 mutation played a causal role in premature leaf senescence through a combination of ROS and SA signals. To conclude, OsPLS1 is implicated in leaf senescence and seed dormancy in rice.

Indexed as

AgingChromosome MappingCloning, MolecularCytosineGenes, PlantOryzaPlant DormancyPlant LeavesReactive Oxygen SpeciesReal-Time Polymerase Chain ReactionSequence AnalysisSequence DeletionSignal TransductionVacuolar Proton-Translocating ATPasesCytosineReactive Oxygen SpeciesVacuolar Proton-Translocating ATPasesOryza sativa L.OsPLS1premature leaf senescenceROSSAseed dormancyvacuolar-type H+-ATPase.

Identifiers

PMID26994476
PMCPMC4861022
OpenAlexW2299411139

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.